Protein–RNA interactions for Protein: Q9CXE6

Xrcc3, DNA repair protein XRCC3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc3Q9CXE6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc3Q9CXE6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Xrcc3Q9CXE6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc3Q9CXE6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc3Q9CXE6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc3Q9CXE6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xrcc3Q9CXE6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Xrcc3Q9CXE6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xrcc3Q9CXE6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Xrcc3Q9CXE6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.95■□□□□ 0.62
Xrcc3Q9CXE6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Xrcc3Q9CXE6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Xrcc3Q9CXE6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Xrcc3Q9CXE6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc3Q9CXE6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc3Q9CXE6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc3Q9CXE6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Xrcc3Q9CXE6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc3Q9CXE6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Xrcc3Q9CXE6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrcc3Q9CXE6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Xrcc3Q9CXE6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc3Q9CXE6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc3Q9CXE6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc3Q9CXE6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc3Q9CXE6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Gm16148-201ENSMUST00000119653 893 ntBASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xrcc3Q9CXE6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xrcc3Q9CXE6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Xrcc3Q9CXE6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Xrcc3Q9CXE6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Xrcc3Q9CXE6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.83■□□□□ 0.6
Xrcc3Q9CXE6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Xrcc3Q9CXE6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Xrcc3Q9CXE6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc3Q9CXE6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc3Q9CXE6 Gm24804-201ENSMUST00000174982 85 ntBASIC18.79■□□□□ 0.6
Xrcc3Q9CXE6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrcc3Q9CXE6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrcc3Q9CXE6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Xrcc3Q9CXE6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.78■□□□□ 0.6
Xrcc3Q9CXE6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Xrcc3Q9CXE6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms