Protein–RNA interactions for Protein: Q9CXE6

Xrcc3, DNA repair protein XRCC3, mousemouse

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc3Q9CXE6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc3Q9CXE6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Xrcc3Q9CXE6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc3Q9CXE6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc3Q9CXE6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc3Q9CXE6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xrcc3Q9CXE6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Xrcc3Q9CXE6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xrcc3Q9CXE6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Xrcc3Q9CXE6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.95■□□□□ 0.62
Xrcc3Q9CXE6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Xrcc3Q9CXE6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Xrcc3Q9CXE6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Xrcc3Q9CXE6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc3Q9CXE6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc3Q9CXE6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc3Q9CXE6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Xrcc3Q9CXE6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc3Q9CXE6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc3Q9CXE6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc3Q9CXE6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc3Q9CXE6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Xrcc3Q9CXE6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrcc3Q9CXE6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Xrcc3Q9CXE6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc3Q9CXE6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Xrcc3Q9CXE6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc3Q9CXE6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc3Q9CXE6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc3Q9CXE6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc3Q9CXE6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Gm16148-201ENSMUST00000119653 893 ntBASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc3Q9CXE6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xrcc3Q9CXE6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xrcc3Q9CXE6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Xrcc3Q9CXE6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Xrcc3Q9CXE6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Xrcc3Q9CXE6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.83■□□□□ 0.6
Xrcc3Q9CXE6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Xrcc3Q9CXE6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Xrcc3Q9CXE6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc3Q9CXE6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc3Q9CXE6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc3Q9CXE6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc3Q9CXE6 Gm24804-201ENSMUST00000174982 85 ntBASIC18.79■□□□□ 0.6
Xrcc3Q9CXE6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrcc3Q9CXE6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrcc3Q9CXE6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Xrcc3Q9CXE6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.78■□□□□ 0.6
Xrcc3Q9CXE6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xrcc3Q9CXE6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Xrcc3Q9CXE6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms