Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb20Q91XZ9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb20Q91XZ9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb20Q91XZ9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb20Q91XZ9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb20Q91XZ9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb20Q91XZ9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb20Q91XZ9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Pcdhb20Q91XZ9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.22
Pcdhb20Q91XZ9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb20Q91XZ9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb20Q91XZ9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb20Q91XZ9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb20Q91XZ9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhb20Q91XZ9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb20Q91XZ9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.65■■□□□ 1.22
Pcdhb20Q91XZ9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb20Q91XZ9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.64■■□□□ 1.21
Pcdhb20Q91XZ9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb20Q91XZ9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb20Q91XZ9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb20Q91XZ9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb20Q91XZ9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb20Q91XZ9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.61■■□□□ 1.21
Pcdhb20Q91XZ9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb20Q91XZ9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb20Q91XZ9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb20Q91XZ9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.59■■□□□ 1.21
Pcdhb20Q91XZ9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Pcdhb20Q91XZ9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb20Q91XZ9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb20Q91XZ9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb20Q91XZ9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb20Q91XZ9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Pcdhb20Q91XZ9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb20Q91XZ9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb20Q91XZ9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.53■■□□□ 1.2
Pcdhb20Q91XZ9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Pcdhb20Q91XZ9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.19
Pcdhb20Q91XZ9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb20Q91XZ9 Gm37136-201ENSMUST00000194368 194 ntBASIC22.51■■□□□ 1.19
Pcdhb20Q91XZ9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.5■■□□□ 1.19
Pcdhb20Q91XZ9 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.5■■□□□ 1.19
Pcdhb20Q91XZ9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhb20Q91XZ9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb20Q91XZ9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb20Q91XZ9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.49■■□□□ 1.19
Pcdhb20Q91XZ9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb20Q91XZ9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Pcdhb20Q91XZ9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.48■■□□□ 1.19
Pcdhb20Q91XZ9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb20Q91XZ9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb20Q91XZ9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb20Q91XZ9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb20Q91XZ9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb20Q91XZ9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb20Q91XZ9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb20Q91XZ9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
Pcdhb20Q91XZ9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Pcdhb20Q91XZ9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Pcdhb20Q91XZ9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Pcdhb20Q91XZ9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.44■■□□□ 1.18
Pcdhb20Q91XZ9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.44■■□□□ 1.18
Pcdhb20Q91XZ9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb20Q91XZ9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb20Q91XZ9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb20Q91XZ9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhb20Q91XZ9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb20Q91XZ9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb20Q91XZ9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.4■■□□□ 1.18
Pcdhb20Q91XZ9 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.4■■□□□ 1.18
Pcdhb20Q91XZ9 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.4■■□□□ 1.18
Pcdhb20Q91XZ9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb20Q91XZ9 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC22.39■■□□□ 1.17
Pcdhb20Q91XZ9 Gm4799-201ENSMUST00000095396 657 ntBASIC22.39■■□□□ 1.17
Pcdhb20Q91XZ9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb20Q91XZ9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb20Q91XZ9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb20Q91XZ9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Pcdhb20Q91XZ9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Pcdhb20Q91XZ9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhb20Q91XZ9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.37■■□□□ 1.17
Pcdhb20Q91XZ9 Gm6311-201ENSMUST00000073790 878 ntBASIC22.37■■□□□ 1.17
Pcdhb20Q91XZ9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb20Q91XZ9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhb20Q91XZ9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb20Q91XZ9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhb20Q91XZ9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb20Q91XZ9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb20Q91XZ9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcdhb20Q91XZ9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb20Q91XZ9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhb20Q91XZ9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Pcdhb20Q91XZ9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.32■■□□□ 1.16
Pcdhb20Q91XZ9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb20Q91XZ9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.31■■□□□ 1.16
Pcdhb20Q91XZ9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Pcdhb20Q91XZ9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb20Q91XZ9 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.3■■□□□ 1.16
Pcdhb20Q91XZ9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms