Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgc3Q91XX1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgc3Q91XX1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgc3Q91XX1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgc3Q91XX1 Gm16148-201ENSMUST00000119653 893 ntBASIC22.13■■□□□ 1.13
Pcdhgc3Q91XX1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc3Q91XX1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc3Q91XX1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc3Q91XX1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
Pcdhgc3Q91XX1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc3Q91XX1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc3Q91XX1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc3Q91XX1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc3Q91XX1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc3Q91XX1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc3Q91XX1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc3Q91XX1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc3Q91XX1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc3Q91XX1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Pcdhgc3Q91XX1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc3Q91XX1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgc3Q91XX1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgc3Q91XX1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgc3Q91XX1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhgc3Q91XX1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgc3Q91XX1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhgc3Q91XX1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgc3Q91XX1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhgc3Q91XX1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgc3Q91XX1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhgc3Q91XX1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.08■■□□□ 1.12
Pcdhgc3Q91XX1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdhgc3Q91XX1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.08■■□□□ 1.12
Pcdhgc3Q91XX1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.07■■□□□ 1.12
Pcdhgc3Q91XX1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc3Q91XX1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc3Q91XX1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.07■■□□□ 1.12
Pcdhgc3Q91XX1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc3Q91XX1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc3Q91XX1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhgc3Q91XX1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgc3Q91XX1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Pcdhgc3Q91XX1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgc3Q91XX1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.05■■□□□ 1.12
Pcdhgc3Q91XX1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgc3Q91XX1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc3Q91XX1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc3Q91XX1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhgc3Q91XX1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc3Q91XX1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc3Q91XX1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc3Q91XX1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc3Q91XX1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhgc3Q91XX1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.03■■□□□ 1.12
Pcdhgc3Q91XX1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgc3Q91XX1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhgc3Q91XX1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Pcdhgc3Q91XX1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgc3Q91XX1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgc3Q91XX1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdhgc3Q91XX1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Pcdhgc3Q91XX1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgc3Q91XX1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgc3Q91XX1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhgc3Q91XX1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhgc3Q91XX1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhgc3Q91XX1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdhgc3Q91XX1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.99■■□□□ 1.11
Pcdhgc3Q91XX1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhgc3Q91XX1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgc3Q91XX1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhgc3Q91XX1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgc3Q91XX1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgc3Q91XX1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgc3Q91XX1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgc3Q91XX1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgc3Q91XX1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgc3Q91XX1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgc3Q91XX1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhgc3Q91XX1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgc3Q91XX1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgc3Q91XX1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgc3Q91XX1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.96■■□□□ 1.11
Pcdhgc3Q91XX1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhgc3Q91XX1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgc3Q91XX1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgc3Q91XX1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcdhgc3Q91XX1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Pcdhgc3Q91XX1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhgc3Q91XX1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgc3Q91XX1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgc3Q91XX1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhgc3Q91XX1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Pcdhgc3Q91XX1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhgc3Q91XX1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcdhgc3Q91XX1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgc3Q91XX1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhgc3Q91XX1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgc3Q91XX1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Pcdhgc3Q91XX1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms