Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Sgms1Q8VCQ6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Sgms1Q8VCQ6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Sgms1Q8VCQ6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Sgms1Q8VCQ6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sgms1Q8VCQ6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Sgms1Q8VCQ6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sgms1Q8VCQ6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Sgms1Q8VCQ6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.69■■□□□ 1.7
Sgms1Q8VCQ6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sgms1Q8VCQ6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.69■■□□□ 1.7
Sgms1Q8VCQ6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sgms1Q8VCQ6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
Sgms1Q8VCQ6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.68■■□□□ 1.7
Sgms1Q8VCQ6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sgms1Q8VCQ6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Sgms1Q8VCQ6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sgms1Q8VCQ6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Sgms1Q8VCQ6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sgms1Q8VCQ6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.65■■□□□ 1.7
Sgms1Q8VCQ6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sgms1Q8VCQ6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sgms1Q8VCQ6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
Sgms1Q8VCQ6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sgms1Q8VCQ6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Sgms1Q8VCQ6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sgms1Q8VCQ6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
Sgms1Q8VCQ6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.61■■□□□ 1.69
Sgms1Q8VCQ6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sgms1Q8VCQ6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sgms1Q8VCQ6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Sgms1Q8VCQ6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sgms1Q8VCQ6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Sgms1Q8VCQ6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Sgms1Q8VCQ6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Sgms1Q8VCQ6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Sgms1Q8VCQ6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
Sgms1Q8VCQ6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sgms1Q8VCQ6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Sgms1Q8VCQ6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.55■■□□□ 1.68
Sgms1Q8VCQ6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Sgms1Q8VCQ6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.53■■□□□ 1.68
Sgms1Q8VCQ6 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.53■■□□□ 1.68
Sgms1Q8VCQ6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sgms1Q8VCQ6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Sgms1Q8VCQ6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.52■■□□□ 1.68
Sgms1Q8VCQ6 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.52■■□□□ 1.68
Sgms1Q8VCQ6 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.52■■□□□ 1.68
Sgms1Q8VCQ6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.51■■□□□ 1.67
Sgms1Q8VCQ6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Sgms1Q8VCQ6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sgms1Q8VCQ6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sgms1Q8VCQ6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Sgms1Q8VCQ6 Particl-201ENSMUST00000205370 1560 ntBASIC25.5■■□□□ 1.67
Sgms1Q8VCQ6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sgms1Q8VCQ6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sgms1Q8VCQ6 Nkain2-201ENSMUST00000092602 558 ntBASIC25.48■■□□□ 1.67
Sgms1Q8VCQ6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Sgms1Q8VCQ6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Sgms1Q8VCQ6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Sgms1Q8VCQ6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sgms1Q8VCQ6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sgms1Q8VCQ6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
Sgms1Q8VCQ6 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.46■■□□□ 1.67
Sgms1Q8VCQ6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sgms1Q8VCQ6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
Sgms1Q8VCQ6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Sgms1Q8VCQ6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Sgms1Q8VCQ6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sgms1Q8VCQ6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sgms1Q8VCQ6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sgms1Q8VCQ6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sgms1Q8VCQ6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sgms1Q8VCQ6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Sgms1Q8VCQ6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sgms1Q8VCQ6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sgms1Q8VCQ6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Sgms1Q8VCQ6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Sgms1Q8VCQ6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Sgms1Q8VCQ6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sgms1Q8VCQ6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sgms1Q8VCQ6 Gm8503-201ENSMUST00000118131 455 ntBASIC25.4■■□□□ 1.66
Sgms1Q8VCQ6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
Sgms1Q8VCQ6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sgms1Q8VCQ6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.39■■□□□ 1.66
Sgms1Q8VCQ6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Sgms1Q8VCQ6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Sgms1Q8VCQ6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sgms1Q8VCQ6 Gm6821-201ENSMUST00000107540 542 ntBASIC25.37■■□□□ 1.65
Sgms1Q8VCQ6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sgms1Q8VCQ6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sgms1Q8VCQ6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sgms1Q8VCQ6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sgms1Q8VCQ6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sgms1Q8VCQ6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.36■■□□□ 1.65
Sgms1Q8VCQ6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.36■■□□□ 1.65
Sgms1Q8VCQ6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.34■■□□□ 1.65
Sgms1Q8VCQ6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
Sgms1Q8VCQ6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Sgms1Q8VCQ6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms