Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Zcchc9Q8R1J3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Zcchc9Q8R1J3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Zcchc9Q8R1J3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Zcchc9Q8R1J3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Zcchc9Q8R1J3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Zcchc9Q8R1J3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Zcchc9Q8R1J3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Zcchc9Q8R1J3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Zcchc9Q8R1J3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.48■■□□□ 1.35
Zcchc9Q8R1J3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.48■■□□□ 1.35
Zcchc9Q8R1J3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Zcchc9Q8R1J3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Zcchc9Q8R1J3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Zcchc9Q8R1J3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.47■■□□□ 1.35
Zcchc9Q8R1J3 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.47■■□□□ 1.35
Zcchc9Q8R1J3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Zcchc9Q8R1J3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Zcchc9Q8R1J3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Zcchc9Q8R1J3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.45■■□□□ 1.34
Zcchc9Q8R1J3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Zcchc9Q8R1J3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Zcchc9Q8R1J3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Zcchc9Q8R1J3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Zcchc9Q8R1J3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Zcchc9Q8R1J3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Zcchc9Q8R1J3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Zcchc9Q8R1J3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Zcchc9Q8R1J3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Zcchc9Q8R1J3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Zcchc9Q8R1J3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Zcchc9Q8R1J3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.41■■□□□ 1.34
Zcchc9Q8R1J3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Zcchc9Q8R1J3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Zcchc9Q8R1J3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Zcchc9Q8R1J3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Zcchc9Q8R1J3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Zcchc9Q8R1J3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.38■■□□□ 1.33
Zcchc9Q8R1J3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Zcchc9Q8R1J3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Zcchc9Q8R1J3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Zcchc9Q8R1J3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.36■■□□□ 1.33
Zcchc9Q8R1J3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Zcchc9Q8R1J3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Zcchc9Q8R1J3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Zcchc9Q8R1J3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Zcchc9Q8R1J3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Zcchc9Q8R1J3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Zcchc9Q8R1J3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Zcchc9Q8R1J3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Zcchc9Q8R1J3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.32■■□□□ 1.32
Zcchc9Q8R1J3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.32■■□□□ 1.32
Zcchc9Q8R1J3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Zcchc9Q8R1J3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.31■■□□□ 1.32
Zcchc9Q8R1J3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Zcchc9Q8R1J3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.31■■□□□ 1.32
Zcchc9Q8R1J3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Zcchc9Q8R1J3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Zcchc9Q8R1J3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Zcchc9Q8R1J3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.3■■□□□ 1.32
Zcchc9Q8R1J3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Zcchc9Q8R1J3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.3■■□□□ 1.32
Zcchc9Q8R1J3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Zcchc9Q8R1J3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Zcchc9Q8R1J3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Zcchc9Q8R1J3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Zcchc9Q8R1J3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Zcchc9Q8R1J3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Zcchc9Q8R1J3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Zcchc9Q8R1J3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Zcchc9Q8R1J3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Zcchc9Q8R1J3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Zcchc9Q8R1J3 Scarna2-201ENSMUST00000157560 414 ntBASIC23.27■■□□□ 1.32
Zcchc9Q8R1J3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Zcchc9Q8R1J3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Zcchc9Q8R1J3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Zcchc9Q8R1J3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Zcchc9Q8R1J3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.25■■□□□ 1.31
Zcchc9Q8R1J3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Zcchc9Q8R1J3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Zcchc9Q8R1J3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Zcchc9Q8R1J3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Zcchc9Q8R1J3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Zcchc9Q8R1J3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Zcchc9Q8R1J3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.23■■□□□ 1.31
Zcchc9Q8R1J3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Zcchc9Q8R1J3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Zcchc9Q8R1J3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Zcchc9Q8R1J3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.22■■□□□ 1.31
Zcchc9Q8R1J3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Zcchc9Q8R1J3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.22■■□□□ 1.31
Zcchc9Q8R1J3 Gm11687-201ENSMUST00000118911 886 ntBASIC23.22■■□□□ 1.31
Zcchc9Q8R1J3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Zcchc9Q8R1J3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Zcchc9Q8R1J3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Zcchc9Q8R1J3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Zcchc9Q8R1J3 Gm9806-201ENSMUST00000051080 552 ntBASIC23.21■■□□□ 1.31
Zcchc9Q8R1J3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Zcchc9Q8R1J3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Zcchc9Q8R1J3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms