Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Nckap1lQ8K1X4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Nckap1lQ8K1X4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Nckap1lQ8K1X4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nckap1lQ8K1X4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Nckap1lQ8K1X4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Nckap1lQ8K1X4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
Nckap1lQ8K1X4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Nckap1lQ8K1X4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nckap1lQ8K1X4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nckap1lQ8K1X4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nckap1lQ8K1X4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nckap1lQ8K1X4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Nckap1lQ8K1X4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nckap1lQ8K1X4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nckap1lQ8K1X4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Nckap1lQ8K1X4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nckap1lQ8K1X4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nckap1lQ8K1X4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Nckap1lQ8K1X4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nckap1lQ8K1X4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nckap1lQ8K1X4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Nckap1lQ8K1X4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nckap1lQ8K1X4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nckap1lQ8K1X4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.67■■□□□ 1.22
Nckap1lQ8K1X4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Nckap1lQ8K1X4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nckap1lQ8K1X4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nckap1lQ8K1X4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nckap1lQ8K1X4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.65■■□□□ 1.22
Nckap1lQ8K1X4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nckap1lQ8K1X4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Nckap1lQ8K1X4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nckap1lQ8K1X4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.64■■□□□ 1.21
Nckap1lQ8K1X4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Nckap1lQ8K1X4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nckap1lQ8K1X4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nckap1lQ8K1X4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nckap1lQ8K1X4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Nckap1lQ8K1X4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Nckap1lQ8K1X4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nckap1lQ8K1X4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nckap1lQ8K1X4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nckap1lQ8K1X4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nckap1lQ8K1X4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nckap1lQ8K1X4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.61■■□□□ 1.21
Nckap1lQ8K1X4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.6■■□□□ 1.21
Nckap1lQ8K1X4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.59■■□□□ 1.21
Nckap1lQ8K1X4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Nckap1lQ8K1X4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Nckap1lQ8K1X4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.58■■□□□ 1.21
Nckap1lQ8K1X4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nckap1lQ8K1X4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Nckap1lQ8K1X4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nckap1lQ8K1X4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nckap1lQ8K1X4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nckap1lQ8K1X4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nckap1lQ8K1X4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Nckap1lQ8K1X4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nckap1lQ8K1X4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nckap1lQ8K1X4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nckap1lQ8K1X4 Gm30023-201ENSMUST00000197970 889 ntBASIC22.57■■□□□ 1.2
Nckap1lQ8K1X4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
Nckap1lQ8K1X4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nckap1lQ8K1X4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nckap1lQ8K1X4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nckap1lQ8K1X4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nckap1lQ8K1X4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nckap1lQ8K1X4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Nckap1lQ8K1X4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nckap1lQ8K1X4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.55■■□□□ 1.2
Nckap1lQ8K1X4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Nckap1lQ8K1X4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nckap1lQ8K1X4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Nckap1lQ8K1X4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nckap1lQ8K1X4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nckap1lQ8K1X4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Nckap1lQ8K1X4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nckap1lQ8K1X4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nckap1lQ8K1X4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nckap1lQ8K1X4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.53■■□□□ 1.2
Nckap1lQ8K1X4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
Nckap1lQ8K1X4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nckap1lQ8K1X4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Nckap1lQ8K1X4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Nckap1lQ8K1X4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Nckap1lQ8K1X4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Nckap1lQ8K1X4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Nckap1lQ8K1X4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Nckap1lQ8K1X4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Nckap1lQ8K1X4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Nckap1lQ8K1X4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Nckap1lQ8K1X4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nckap1lQ8K1X4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nckap1lQ8K1X4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nckap1lQ8K1X4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.49■■□□□ 1.19
Nckap1lQ8K1X4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Nckap1lQ8K1X4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nckap1lQ8K1X4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nckap1lQ8K1X4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms