Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Rab11fip3Q8CHD8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Rab11fip3Q8CHD8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Rab11fip3Q8CHD8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Rab11fip3Q8CHD8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
Rab11fip3Q8CHD8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
Rab11fip3Q8CHD8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.95■■■□□ 2.55
Rab11fip3Q8CHD8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Rab11fip3Q8CHD8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Rab11fip3Q8CHD8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Rab11fip3Q8CHD8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Rab11fip3Q8CHD8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Rab11fip3Q8CHD8 Gm37136-201ENSMUST00000194368 194 ntBASIC30.9■■■□□ 2.54
Rab11fip3Q8CHD8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC30.9■■■□□ 2.54
Rab11fip3Q8CHD8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.9■■■□□ 2.54
Rab11fip3Q8CHD8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC30.9■■■□□ 2.54
Rab11fip3Q8CHD8 Gm6311-201ENSMUST00000073790 878 ntBASIC30.89■■■□□ 2.54
Rab11fip3Q8CHD8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Rab11fip3Q8CHD8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC30.88■■■□□ 2.53
Rab11fip3Q8CHD8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
Rab11fip3Q8CHD8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Rab11fip3Q8CHD8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.86■■■□□ 2.53
Rab11fip3Q8CHD8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rab11fip3Q8CHD8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rab11fip3Q8CHD8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
Rab11fip3Q8CHD8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.85■■■□□ 2.53
Rab11fip3Q8CHD8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Rab11fip3Q8CHD8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Rab11fip3Q8CHD8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Rab11fip3Q8CHD8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Rab11fip3Q8CHD8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30.81■■■□□ 2.52
Rab11fip3Q8CHD8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Rab11fip3Q8CHD8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
Rab11fip3Q8CHD8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rab11fip3Q8CHD8 Mir6538-201ENSMUST00000183713 110 ntBASIC30.8■■■□□ 2.52
Rab11fip3Q8CHD8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rab11fip3Q8CHD8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Rab11fip3Q8CHD8 Gm4799-201ENSMUST00000095396 657 ntBASIC30.79■■■□□ 2.52
Rab11fip3Q8CHD8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rab11fip3Q8CHD8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC30.78■■■□□ 2.52
Rab11fip3Q8CHD8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Rab11fip3Q8CHD8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30.77■■■□□ 2.52
Rab11fip3Q8CHD8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Rab11fip3Q8CHD8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC30.76■■■□□ 2.51
Rab11fip3Q8CHD8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Rab11fip3Q8CHD8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rab11fip3Q8CHD8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rab11fip3Q8CHD8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rab11fip3Q8CHD8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rab11fip3Q8CHD8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30.74■■■□□ 2.51
Rab11fip3Q8CHD8 AC154454.1-201ENSMUST00000225253 216 ntBASIC30.74■■■□□ 2.51
Rab11fip3Q8CHD8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Rab11fip3Q8CHD8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rab11fip3Q8CHD8 Gm11175-201ENSMUST00000116172 543 ntBASIC30.73■■■□□ 2.51
Rab11fip3Q8CHD8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
Rab11fip3Q8CHD8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rab11fip3Q8CHD8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rab11fip3Q8CHD8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC30.72■■■□□ 2.51
Rab11fip3Q8CHD8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Rab11fip3Q8CHD8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Rab11fip3Q8CHD8 Mir3960-201ENSMUST00000198213 73 ntBASIC30.69■■■□□ 2.5
Rab11fip3Q8CHD8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Rab11fip3Q8CHD8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rab11fip3Q8CHD8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Rab11fip3Q8CHD8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rab11fip3Q8CHD8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rab11fip3Q8CHD8 Amer2-203ENSMUST00000225247 2662 ntBASIC30.66■■■□□ 2.5
Rab11fip3Q8CHD8 Gm13889-201ENSMUST00000099689 1386 ntBASIC30.66■■■□□ 2.5
Rab11fip3Q8CHD8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rab11fip3Q8CHD8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rab11fip3Q8CHD8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30.65■■■□□ 2.5
Rab11fip3Q8CHD8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.64■■■□□ 2.5
Rab11fip3Q8CHD8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rab11fip3Q8CHD8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rab11fip3Q8CHD8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Rab11fip3Q8CHD8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.62■■■□□ 2.49
Rab11fip3Q8CHD8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rab11fip3Q8CHD8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Rab11fip3Q8CHD8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rab11fip3Q8CHD8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rab11fip3Q8CHD8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Rab11fip3Q8CHD8 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.6■■■□□ 2.49
Rab11fip3Q8CHD8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rab11fip3Q8CHD8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC30.59■■■□□ 2.49
Rab11fip3Q8CHD8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Rab11fip3Q8CHD8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rab11fip3Q8CHD8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Rab11fip3Q8CHD8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC30.58■■■□□ 2.49
Rab11fip3Q8CHD8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Rab11fip3Q8CHD8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rab11fip3Q8CHD8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
Rab11fip3Q8CHD8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Rab11fip3Q8CHD8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Rab11fip3Q8CHD8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Rab11fip3Q8CHD8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Rab11fip3Q8CHD8 Gm45364-201ENSMUST00000210883 159 ntBASIC30.54■■■□□ 2.48
Rab11fip3Q8CHD8 Gm12818-201ENSMUST00000117562 1349 ntBASIC30.53■■■□□ 2.48
Rab11fip3Q8CHD8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Rab11fip3Q8CHD8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
Rab11fip3Q8CHD8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms