Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rab43Q8CG50 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rab43Q8CG50 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rab43Q8CG50 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.19■■□□□ 1.3
Rab43Q8CG50 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab43Q8CG50 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.18■■□□□ 1.3
Rab43Q8CG50 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.18■■□□□ 1.3
Rab43Q8CG50 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab43Q8CG50 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.18■■□□□ 1.3
Rab43Q8CG50 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rab43Q8CG50 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab43Q8CG50 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.17■■□□□ 1.3
Rab43Q8CG50 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Rab43Q8CG50 Gm4799-201ENSMUST00000095396 657 ntBASIC23.17■■□□□ 1.3
Rab43Q8CG50 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rab43Q8CG50 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.16■■□□□ 1.3
Rab43Q8CG50 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rab43Q8CG50 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.16■■□□□ 1.3
Rab43Q8CG50 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rab43Q8CG50 Scarna2-201ENSMUST00000157560 414 ntBASIC23.15■■□□□ 1.3
Rab43Q8CG50 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.15■■□□□ 1.3
Rab43Q8CG50 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rab43Q8CG50 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.15■■□□□ 1.3
Rab43Q8CG50 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.14■■□□□ 1.3
Rab43Q8CG50 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.14■■□□□ 1.29
Rab43Q8CG50 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Rab43Q8CG50 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.12■■□□□ 1.29
Rab43Q8CG50 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rab43Q8CG50 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.12■■□□□ 1.29
Rab43Q8CG50 Gm11687-201ENSMUST00000118911 886 ntBASIC23.12■■□□□ 1.29
Rab43Q8CG50 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.12■■□□□ 1.29
Rab43Q8CG50 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rab43Q8CG50 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rab43Q8CG50 Gm9806-201ENSMUST00000051080 552 ntBASIC23.12■■□□□ 1.29
Rab43Q8CG50 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rab43Q8CG50 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rab43Q8CG50 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.11■■□□□ 1.29
Rab43Q8CG50 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Rab43Q8CG50 Mir3960-201ENSMUST00000198213 73 ntBASIC23.1■■□□□ 1.29
Rab43Q8CG50 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rab43Q8CG50 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rab43Q8CG50 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rab43Q8CG50 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rab43Q8CG50 Gm37136-201ENSMUST00000194368 194 ntBASIC23.08■■□□□ 1.29
Rab43Q8CG50 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rab43Q8CG50 Zxda-201ENSMUST00000117281 2621 ntBASIC23.07■■□□□ 1.28
Rab43Q8CG50 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rab43Q8CG50 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.05■■□□□ 1.28
Rab43Q8CG50 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rab43Q8CG50 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rab43Q8CG50 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab43Q8CG50 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rab43Q8CG50 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rab43Q8CG50 Gm16437-201ENSMUST00000025669 507 ntBASIC23.03■■□□□ 1.28
Rab43Q8CG50 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rab43Q8CG50 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rab43Q8CG50 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rab43Q8CG50 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rab43Q8CG50 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.01■■□□□ 1.27
Rab43Q8CG50 Gm45364-201ENSMUST00000210883 159 ntBASIC23.01■■□□□ 1.27
Rab43Q8CG50 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rab43Q8CG50 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Rab43Q8CG50 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.99■■□□□ 1.27
Rab43Q8CG50 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rab43Q8CG50 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rab43Q8CG50 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rab43Q8CG50 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rab43Q8CG50 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
Rab43Q8CG50 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.98■■□□□ 1.27
Rab43Q8CG50 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rab43Q8CG50 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rab43Q8CG50 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.96■■□□□ 1.27
Rab43Q8CG50 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rab43Q8CG50 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rab43Q8CG50 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rab43Q8CG50 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rab43Q8CG50 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rab43Q8CG50 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.95■■□□□ 1.26
Rab43Q8CG50 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rab43Q8CG50 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rab43Q8CG50 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.93■■□□□ 1.26
Rab43Q8CG50 Gm12366-201ENSMUST00000121722 873 ntBASIC22.93■■□□□ 1.26
Rab43Q8CG50 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.93■■□□□ 1.26
Rab43Q8CG50 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.93■■□□□ 1.26
Rab43Q8CG50 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.93■■□□□ 1.26
Rab43Q8CG50 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rab43Q8CG50 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.93■■□□□ 1.26
Rab43Q8CG50 Gm5786-201ENSMUST00000085368 882 ntBASIC22.93■■□□□ 1.26
Rab43Q8CG50 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Rab43Q8CG50 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
Rab43Q8CG50 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rab43Q8CG50 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rab43Q8CG50 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Rab43Q8CG50 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
Rab43Q8CG50 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.91■■□□□ 1.26
Rab43Q8CG50 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Rab43Q8CG50 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Rab43Q8CG50 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rab43Q8CG50 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rab43Q8CG50 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms