Protein–RNA interactions for Protein: Q8CFE3

Rcor1, REST corepressor 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcor1Q8CFE3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.65■■□□□ 1.22
Rcor1Q8CFE3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rcor1Q8CFE3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rcor1Q8CFE3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rcor1Q8CFE3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rcor1Q8CFE3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rcor1Q8CFE3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rcor1Q8CFE3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rcor1Q8CFE3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rcor1Q8CFE3 Gm45855-201ENSMUST00000212546 880 ntBASIC22.62■■□□□ 1.21
Rcor1Q8CFE3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
Rcor1Q8CFE3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rcor1Q8CFE3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Rcor1Q8CFE3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rcor1Q8CFE3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Rcor1Q8CFE3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Rcor1Q8CFE3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rcor1Q8CFE3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rcor1Q8CFE3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rcor1Q8CFE3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rcor1Q8CFE3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.6■■□□□ 1.21
Rcor1Q8CFE3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rcor1Q8CFE3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rcor1Q8CFE3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rcor1Q8CFE3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rcor1Q8CFE3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rcor1Q8CFE3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.58■■□□□ 1.21
Rcor1Q8CFE3 Gm30023-201ENSMUST00000197970 889 ntBASIC22.58■■□□□ 1.21
Rcor1Q8CFE3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rcor1Q8CFE3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rcor1Q8CFE3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Rcor1Q8CFE3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rcor1Q8CFE3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.56■■□□□ 1.2
Rcor1Q8CFE3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rcor1Q8CFE3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rcor1Q8CFE3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rcor1Q8CFE3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rcor1Q8CFE3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rcor1Q8CFE3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.54■■□□□ 1.2
Rcor1Q8CFE3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rcor1Q8CFE3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rcor1Q8CFE3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rcor1Q8CFE3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rcor1Q8CFE3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rcor1Q8CFE3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rcor1Q8CFE3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rcor1Q8CFE3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rcor1Q8CFE3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Rcor1Q8CFE3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
Rcor1Q8CFE3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rcor1Q8CFE3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rcor1Q8CFE3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Rcor1Q8CFE3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rcor1Q8CFE3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rcor1Q8CFE3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rcor1Q8CFE3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rcor1Q8CFE3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rcor1Q8CFE3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rcor1Q8CFE3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rcor1Q8CFE3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.47■■□□□ 1.19
Rcor1Q8CFE3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.47■■□□□ 1.19
Rcor1Q8CFE3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rcor1Q8CFE3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.46■■□□□ 1.19
Rcor1Q8CFE3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rcor1Q8CFE3 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.46■■□□□ 1.19
Rcor1Q8CFE3 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.46■■□□□ 1.19
Rcor1Q8CFE3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Rcor1Q8CFE3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rcor1Q8CFE3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rcor1Q8CFE3 Particl-201ENSMUST00000205370 1560 ntBASIC22.45■■□□□ 1.18
Rcor1Q8CFE3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rcor1Q8CFE3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rcor1Q8CFE3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Rcor1Q8CFE3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rcor1Q8CFE3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rcor1Q8CFE3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rcor1Q8CFE3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rcor1Q8CFE3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rcor1Q8CFE3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rcor1Q8CFE3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rcor1Q8CFE3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
Rcor1Q8CFE3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rcor1Q8CFE3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rcor1Q8CFE3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rcor1Q8CFE3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rcor1Q8CFE3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rcor1Q8CFE3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rcor1Q8CFE3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rcor1Q8CFE3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rcor1Q8CFE3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.4■■□□□ 1.18
Rcor1Q8CFE3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rcor1Q8CFE3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Rcor1Q8CFE3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rcor1Q8CFE3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Rcor1Q8CFE3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rcor1Q8CFE3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rcor1Q8CFE3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rcor1Q8CFE3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rcor1Q8CFE3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rcor1Q8CFE3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms