Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Q8CDN1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.6■■□□□ 1.53
Q8CDN1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.58■■□□□ 1.53
Q8CDN1 Amer2-203ENSMUST00000225247 2662 ntBASIC24.58■■□□□ 1.52
Q8CDN1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Q8CDN1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Q8CDN1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Q8CDN1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Q8CDN1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Q8CDN1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Q8CDN1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Q8CDN1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Q8CDN1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Q8CDN1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.52■■□□□ 1.52
Q8CDN1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Q8CDN1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
Q8CDN1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Q8CDN1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Q8CDN1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Q8CDN1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Q8CDN1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.5■■□□□ 1.51
Q8CDN1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Q8CDN1 Gm11175-201ENSMUST00000116172 543 ntBASIC24.49■■□□□ 1.51
Q8CDN1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Q8CDN1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Q8CDN1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Q8CDN1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
Q8CDN1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Q8CDN1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Q8CDN1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Q8CDN1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.45■■□□□ 1.5
Q8CDN1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.45■■□□□ 1.5
Q8CDN1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
Q8CDN1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Q8CDN1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Q8CDN1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Q8CDN1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Q8CDN1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Q8CDN1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Q8CDN1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Q8CDN1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Q8CDN1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Q8CDN1 Gm6311-201ENSMUST00000073790 878 ntBASIC24.41■■□□□ 1.5
Q8CDN1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Q8CDN1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Q8CDN1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.4■■□□□ 1.5
Q8CDN1 Gm37136-201ENSMUST00000194368 194 ntBASIC24.4■■□□□ 1.5
Q8CDN1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Q8CDN1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Q8CDN1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.38■■□□□ 1.49
Q8CDN1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Q8CDN1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.38■■□□□ 1.49
Q8CDN1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Q8CDN1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Q8CDN1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Q8CDN1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Q8CDN1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Q8CDN1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Q8CDN1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Q8CDN1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.33■■□□□ 1.49
Q8CDN1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.33■■□□□ 1.49
Q8CDN1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.33■■□□□ 1.49
Q8CDN1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Q8CDN1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.32■■□□□ 1.48
Q8CDN1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Q8CDN1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Q8CDN1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Q8CDN1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Q8CDN1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Q8CDN1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Q8CDN1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Q8CDN1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Q8CDN1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Q8CDN1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Q8CDN1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Q8CDN1 Gm4799-201ENSMUST00000095396 657 ntBASIC24.27■■□□□ 1.48
Q8CDN1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Q8CDN1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Q8CDN1 Mir6538-201ENSMUST00000183713 110 ntBASIC24.26■■□□□ 1.47
Q8CDN1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Q8CDN1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Q8CDN1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Q8CDN1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Q8CDN1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.22■■□□□ 1.47
Q8CDN1 Mir3960-201ENSMUST00000198213 73 ntBASIC24.22■■□□□ 1.47
Q8CDN1 Gm45364-201ENSMUST00000210883 159 ntBASIC24.22■■□□□ 1.47
Q8CDN1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Q8CDN1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Q8CDN1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Q8CDN1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.2■■□□□ 1.46
Q8CDN1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Q8CDN1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Q8CDN1 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.19■■□□□ 1.46
Q8CDN1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Q8CDN1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Q8CDN1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Q8CDN1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Q8CDN1 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.16■■□□□ 1.46
Q8CDN1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Q8CDN1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.16■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms