Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm11175-201ENSMUST00000116172 543 ntBASIC24.17■■□□□ 1.46
Sh3rf2Q8BZT2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Sh3rf2Q8BZT2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
Sh3rf2Q8BZT2 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.15■■□□□ 1.46
Sh3rf2Q8BZT2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sh3rf2Q8BZT2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Sh3rf2Q8BZT2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.14■■□□□ 1.46
Sh3rf2Q8BZT2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Sh3rf2Q8BZT2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.13■■□□□ 1.45
Sh3rf2Q8BZT2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.13■■□□□ 1.45
Sh3rf2Q8BZT2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.13■■□□□ 1.45
Sh3rf2Q8BZT2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sh3rf2Q8BZT2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Sh3rf2Q8BZT2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Sh3rf2Q8BZT2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.11■■□□□ 1.45
Sh3rf2Q8BZT2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Sh3rf2Q8BZT2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sh3rf2Q8BZT2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sh3rf2Q8BZT2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Sh3rf2Q8BZT2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.1■■□□□ 1.45
Sh3rf2Q8BZT2 Mir6538-201ENSMUST00000183713 110 ntBASIC24.09■■□□□ 1.45
Sh3rf2Q8BZT2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.09■■□□□ 1.45
Sh3rf2Q8BZT2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Sh3rf2Q8BZT2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Sh3rf2Q8BZT2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.08■■□□□ 1.45
Sh3rf2Q8BZT2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Sh3rf2Q8BZT2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sh3rf2Q8BZT2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
Sh3rf2Q8BZT2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Sh3rf2Q8BZT2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.05■■□□□ 1.44
Sh3rf2Q8BZT2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
Sh3rf2Q8BZT2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Sh3rf2Q8BZT2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Sh3rf2Q8BZT2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
Sh3rf2Q8BZT2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Sh3rf2Q8BZT2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sh3rf2Q8BZT2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sh3rf2Q8BZT2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sh3rf2Q8BZT2 Gm37136-201ENSMUST00000194368 194 ntBASIC24.02■■□□□ 1.44
Sh3rf2Q8BZT2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sh3rf2Q8BZT2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sh3rf2Q8BZT2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Sh3rf2Q8BZT2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Sh3rf2Q8BZT2 Gm4799-201ENSMUST00000095396 657 ntBASIC24.01■■□□□ 1.43
Sh3rf2Q8BZT2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Sh3rf2Q8BZT2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sh3rf2Q8BZT2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sh3rf2Q8BZT2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Sh3rf2Q8BZT2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Sh3rf2Q8BZT2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Sh3rf2Q8BZT2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sh3rf2Q8BZT2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.97■■□□□ 1.43
Sh3rf2Q8BZT2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sh3rf2Q8BZT2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Sh3rf2Q8BZT2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Sh3rf2Q8BZT2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Sh3rf2Q8BZT2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sh3rf2Q8BZT2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.94■■□□□ 1.42
Sh3rf2Q8BZT2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.93■■□□□ 1.42
Sh3rf2Q8BZT2 Mir3960-201ENSMUST00000198213 73 ntBASIC23.93■■□□□ 1.42
Sh3rf2Q8BZT2 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.93■■□□□ 1.42
Sh3rf2Q8BZT2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Sh3rf2Q8BZT2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sh3rf2Q8BZT2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sh3rf2Q8BZT2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sh3rf2Q8BZT2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Sh3rf2Q8BZT2 Amer2-203ENSMUST00000225247 2662 ntBASIC23.91■■□□□ 1.42
Sh3rf2Q8BZT2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sh3rf2Q8BZT2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Sh3rf2Q8BZT2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Sh3rf2Q8BZT2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.89■■□□□ 1.41
Sh3rf2Q8BZT2 Scarna2-201ENSMUST00000157560 414 ntBASIC23.89■■□□□ 1.41
Sh3rf2Q8BZT2 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.89■■□□□ 1.41
Sh3rf2Q8BZT2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Sh3rf2Q8BZT2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Sh3rf2Q8BZT2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Sh3rf2Q8BZT2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3rf2Q8BZT2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3rf2Q8BZT2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3rf2Q8BZT2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3rf2Q8BZT2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.88■■□□□ 1.41
Sh3rf2Q8BZT2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3rf2Q8BZT2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sh3rf2Q8BZT2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sh3rf2Q8BZT2 Gm45364-201ENSMUST00000210883 159 ntBASIC23.87■■□□□ 1.41
Sh3rf2Q8BZT2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sh3rf2Q8BZT2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3rf2Q8BZT2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
Sh3rf2Q8BZT2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3rf2Q8BZT2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3rf2Q8BZT2 Cap2-205ENSMUST00000225824 1634 ntBASIC23.84■■□□□ 1.41
Sh3rf2Q8BZT2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.84■■□□□ 1.41
Sh3rf2Q8BZT2 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.84■■□□□ 1.41
Sh3rf2Q8BZT2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3rf2Q8BZT2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3rf2Q8BZT2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.83■■□□□ 1.41
Sh3rf2Q8BZT2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3rf2Q8BZT2 Gm9806-201ENSMUST00000051080 552 ntBASIC23.83■■□□□ 1.41
Sh3rf2Q8BZT2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Sh3rf2Q8BZT2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms