Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Slc5a7Q8BGY9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc5a7Q8BGY9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Slc5a7Q8BGY9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc5a7Q8BGY9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.6■□□□□ 0.89
Slc5a7Q8BGY9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc5a7Q8BGY9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc5a7Q8BGY9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc5a7Q8BGY9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc5a7Q8BGY9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Slc5a7Q8BGY9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc5a7Q8BGY9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc5a7Q8BGY9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc5a7Q8BGY9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Slc5a7Q8BGY9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc5a7Q8BGY9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.58■□□□□ 0.89
Slc5a7Q8BGY9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc5a7Q8BGY9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc5a7Q8BGY9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc5a7Q8BGY9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc5a7Q8BGY9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Slc5a7Q8BGY9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.57■□□□□ 0.88
Slc5a7Q8BGY9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc5a7Q8BGY9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc5a7Q8BGY9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc5a7Q8BGY9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Slc5a7Q8BGY9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc5a7Q8BGY9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc5a7Q8BGY9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.55■□□□□ 0.88
Slc5a7Q8BGY9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc5a7Q8BGY9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc5a7Q8BGY9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc5a7Q8BGY9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Slc5a7Q8BGY9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc5a7Q8BGY9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc5a7Q8BGY9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc5a7Q8BGY9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc5a7Q8BGY9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc5a7Q8BGY9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc5a7Q8BGY9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc5a7Q8BGY9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc5a7Q8BGY9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc5a7Q8BGY9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc5a7Q8BGY9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc5a7Q8BGY9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc5a7Q8BGY9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc5a7Q8BGY9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.5■□□□□ 0.87
Slc5a7Q8BGY9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc5a7Q8BGY9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc5a7Q8BGY9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc5a7Q8BGY9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc5a7Q8BGY9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc5a7Q8BGY9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc5a7Q8BGY9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc5a7Q8BGY9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc5a7Q8BGY9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc5a7Q8BGY9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.48■□□□□ 0.87
Slc5a7Q8BGY9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Slc5a7Q8BGY9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slc5a7Q8BGY9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc5a7Q8BGY9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc5a7Q8BGY9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc5a7Q8BGY9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc5a7Q8BGY9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Slc5a7Q8BGY9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc5a7Q8BGY9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc5a7Q8BGY9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Slc5a7Q8BGY9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc5a7Q8BGY9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slc5a7Q8BGY9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slc5a7Q8BGY9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc5a7Q8BGY9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc5a7Q8BGY9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Slc5a7Q8BGY9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc5a7Q8BGY9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc5a7Q8BGY9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc5a7Q8BGY9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc5a7Q8BGY9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc5a7Q8BGY9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc5a7Q8BGY9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc5a7Q8BGY9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc5a7Q8BGY9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.43■□□□□ 0.86
Slc5a7Q8BGY9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.43■□□□□ 0.86
Slc5a7Q8BGY9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Slc5a7Q8BGY9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.43■□□□□ 0.86
Slc5a7Q8BGY9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc5a7Q8BGY9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc5a7Q8BGY9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc5a7Q8BGY9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.42■□□□□ 0.86
Slc5a7Q8BGY9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc5a7Q8BGY9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc5a7Q8BGY9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc5a7Q8BGY9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Slc5a7Q8BGY9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc5a7Q8BGY9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc5a7Q8BGY9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Slc5a7Q8BGY9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Slc5a7Q8BGY9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.4■□□□□ 0.86
Slc5a7Q8BGY9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Slc5a7Q8BGY9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms