Protein–RNA interactions for Protein: Q8BGR9

Ublcp1, Ubiquitin-like domain-containing CTD phosphatase 1, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ublcp1Q8BGR9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ublcp1Q8BGR9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ublcp1Q8BGR9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ublcp1Q8BGR9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.69■■□□□ 1.54
Ublcp1Q8BGR9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ublcp1Q8BGR9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ublcp1Q8BGR9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ublcp1Q8BGR9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ublcp1Q8BGR9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ublcp1Q8BGR9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ublcp1Q8BGR9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ublcp1Q8BGR9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Ublcp1Q8BGR9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ublcp1Q8BGR9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ublcp1Q8BGR9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.67■■□□□ 1.54
Ublcp1Q8BGR9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ublcp1Q8BGR9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ublcp1Q8BGR9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ublcp1Q8BGR9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ublcp1Q8BGR9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ublcp1Q8BGR9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ublcp1Q8BGR9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.65■■□□□ 1.54
Ublcp1Q8BGR9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.64■■□□□ 1.54
Ublcp1Q8BGR9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
Ublcp1Q8BGR9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ublcp1Q8BGR9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
Ublcp1Q8BGR9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ublcp1Q8BGR9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ublcp1Q8BGR9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ublcp1Q8BGR9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ublcp1Q8BGR9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ublcp1Q8BGR9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Ublcp1Q8BGR9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ublcp1Q8BGR9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ublcp1Q8BGR9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ublcp1Q8BGR9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ublcp1Q8BGR9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ublcp1Q8BGR9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ublcp1Q8BGR9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ublcp1Q8BGR9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ublcp1Q8BGR9 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.59■■□□□ 1.53
Ublcp1Q8BGR9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ublcp1Q8BGR9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.57■■□□□ 1.52
Ublcp1Q8BGR9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ublcp1Q8BGR9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ublcp1Q8BGR9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ublcp1Q8BGR9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ublcp1Q8BGR9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Ublcp1Q8BGR9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ublcp1Q8BGR9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ublcp1Q8BGR9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ublcp1Q8BGR9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ublcp1Q8BGR9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ublcp1Q8BGR9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ublcp1Q8BGR9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ublcp1Q8BGR9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ublcp1Q8BGR9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
Ublcp1Q8BGR9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ublcp1Q8BGR9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.52■■□□□ 1.52
Ublcp1Q8BGR9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ublcp1Q8BGR9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ublcp1Q8BGR9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ublcp1Q8BGR9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ublcp1Q8BGR9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ublcp1Q8BGR9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Ublcp1Q8BGR9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ublcp1Q8BGR9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ublcp1Q8BGR9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ublcp1Q8BGR9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.5■■□□□ 1.51
Ublcp1Q8BGR9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ublcp1Q8BGR9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ublcp1Q8BGR9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ublcp1Q8BGR9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
Ublcp1Q8BGR9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ublcp1Q8BGR9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ublcp1Q8BGR9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ublcp1Q8BGR9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ublcp1Q8BGR9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ublcp1Q8BGR9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ublcp1Q8BGR9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Ublcp1Q8BGR9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ublcp1Q8BGR9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ublcp1Q8BGR9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ublcp1Q8BGR9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ublcp1Q8BGR9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
Ublcp1Q8BGR9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ublcp1Q8BGR9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ublcp1Q8BGR9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ublcp1Q8BGR9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ublcp1Q8BGR9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Ublcp1Q8BGR9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Ublcp1Q8BGR9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ublcp1Q8BGR9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ublcp1Q8BGR9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ublcp1Q8BGR9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Ublcp1Q8BGR9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Ublcp1Q8BGR9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ublcp1Q8BGR9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ublcp1Q8BGR9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ublcp1Q8BGR9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms