Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 Gm25262-201ENSMUST00000174934 133 ntBASIC19.21■□□□□ 0.67
Atpaf1Q811I0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atpaf1Q811I0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atpaf1Q811I0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atpaf1Q811I0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atpaf1Q811I0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atpaf1Q811I0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Atpaf1Q811I0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atpaf1Q811I0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.18■□□□□ 0.66
Atpaf1Q811I0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atpaf1Q811I0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atpaf1Q811I0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atpaf1Q811I0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atpaf1Q811I0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Atpaf1Q811I0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atpaf1Q811I0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atpaf1Q811I0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atpaf1Q811I0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Atpaf1Q811I0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Atpaf1Q811I0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Atpaf1Q811I0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atpaf1Q811I0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atpaf1Q811I0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atpaf1Q811I0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Atpaf1Q811I0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atpaf1Q811I0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atpaf1Q811I0 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.13■□□□□ 0.65
Atpaf1Q811I0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atpaf1Q811I0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atpaf1Q811I0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.12■□□□□ 0.65
Atpaf1Q811I0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Atpaf1Q811I0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atpaf1Q811I0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atpaf1Q811I0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atpaf1Q811I0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Atpaf1Q811I0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atpaf1Q811I0 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.09■□□□□ 0.65
Atpaf1Q811I0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atpaf1Q811I0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.09■□□□□ 0.65
Atpaf1Q811I0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atpaf1Q811I0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Atpaf1Q811I0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atpaf1Q811I0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atpaf1Q811I0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atpaf1Q811I0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atpaf1Q811I0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atpaf1Q811I0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Atpaf1Q811I0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atpaf1Q811I0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atpaf1Q811I0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atpaf1Q811I0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.07■□□□□ 0.64
Atpaf1Q811I0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Atpaf1Q811I0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Atpaf1Q811I0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Atpaf1Q811I0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Atpaf1Q811I0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Atpaf1Q811I0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Atpaf1Q811I0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Atpaf1Q811I0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Atpaf1Q811I0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atpaf1Q811I0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atpaf1Q811I0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atpaf1Q811I0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atpaf1Q811I0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Atpaf1Q811I0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atpaf1Q811I0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atpaf1Q811I0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms