Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Amer2-203ENSMUST00000225247 2662 ntBASIC28.92■■■□□ 2.22
Kdm3aQ6PCM1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Kdm3aQ6PCM1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Kdm3aQ6PCM1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Kdm3aQ6PCM1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Kdm3aQ6PCM1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.88■■■□□ 2.21
Kdm3aQ6PCM1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
Kdm3aQ6PCM1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.87■■■□□ 2.21
Kdm3aQ6PCM1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Kdm3aQ6PCM1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Kdm3aQ6PCM1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Kdm3aQ6PCM1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Kdm3aQ6PCM1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Kdm3aQ6PCM1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Kdm3aQ6PCM1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Kdm3aQ6PCM1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Kdm3aQ6PCM1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Kdm3aQ6PCM1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Kdm3aQ6PCM1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.8■■■□□ 2.2
Kdm3aQ6PCM1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Kdm3aQ6PCM1 Gm37136-201ENSMUST00000194368 194 ntBASIC28.74■■■□□ 2.19
Kdm3aQ6PCM1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Kdm3aQ6PCM1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.73■■■□□ 2.19
Kdm3aQ6PCM1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
Kdm3aQ6PCM1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
Kdm3aQ6PCM1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Kdm3aQ6PCM1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.72■■■□□ 2.19
Kdm3aQ6PCM1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28.72■■■□□ 2.19
Kdm3aQ6PCM1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.72■■■□□ 2.19
Kdm3aQ6PCM1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Kdm3aQ6PCM1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Kdm3aQ6PCM1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Kdm3aQ6PCM1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Kdm3aQ6PCM1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Kdm3aQ6PCM1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Kdm3aQ6PCM1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Kdm3aQ6PCM1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm3aQ6PCM1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
Kdm3aQ6PCM1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm3aQ6PCM1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.67■■■□□ 2.18
Kdm3aQ6PCM1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Kdm3aQ6PCM1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Kdm3aQ6PCM1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.66■■■□□ 2.18
Kdm3aQ6PCM1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Kdm3aQ6PCM1 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.65■■■□□ 2.18
Kdm3aQ6PCM1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Kdm3aQ6PCM1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
Kdm3aQ6PCM1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Kdm3aQ6PCM1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
Kdm3aQ6PCM1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
Kdm3aQ6PCM1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Kdm3aQ6PCM1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Kdm3aQ6PCM1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.61■■■□□ 2.17
Kdm3aQ6PCM1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.6■■■□□ 2.17
Kdm3aQ6PCM1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Kdm3aQ6PCM1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Kdm3aQ6PCM1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Kdm3aQ6PCM1 Gm37847-201ENSMUST00000192163 1497 ntBASIC28.56■■■□□ 2.16
Kdm3aQ6PCM1 Gm31748-201ENSMUST00000194938 1497 ntBASIC28.56■■■□□ 2.16
Kdm3aQ6PCM1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
Kdm3aQ6PCM1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Kdm3aQ6PCM1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.56■■■□□ 2.16
Kdm3aQ6PCM1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Kdm3aQ6PCM1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Kdm3aQ6PCM1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Kdm3aQ6PCM1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
Kdm3aQ6PCM1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
Kdm3aQ6PCM1 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.53■■■□□ 2.16
Kdm3aQ6PCM1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Kdm3aQ6PCM1 Gm6311-201ENSMUST00000073790 878 ntBASIC28.52■■■□□ 2.16
Kdm3aQ6PCM1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.51■■■□□ 2.15
Kdm3aQ6PCM1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.5■■■□□ 2.15
Kdm3aQ6PCM1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Kdm3aQ6PCM1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Kdm3aQ6PCM1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
Kdm3aQ6PCM1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.49■■■□□ 2.15
Kdm3aQ6PCM1 Gm4799-201ENSMUST00000095396 657 ntBASIC28.49■■■□□ 2.15
Kdm3aQ6PCM1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Kdm3aQ6PCM1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Kdm3aQ6PCM1 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.47■■■□□ 2.15
Kdm3aQ6PCM1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC28.46■■■□□ 2.15
Kdm3aQ6PCM1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Kdm3aQ6PCM1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.46■■■□□ 2.15
Kdm3aQ6PCM1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.46■■■□□ 2.15
Kdm3aQ6PCM1 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.45■■■□□ 2.15
Kdm3aQ6PCM1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Kdm3aQ6PCM1 Mir3960-201ENSMUST00000198213 73 ntBASIC28.44■■■□□ 2.14
Kdm3aQ6PCM1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Kdm3aQ6PCM1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Kdm3aQ6PCM1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.43■■■□□ 2.14
Kdm3aQ6PCM1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.42■■■□□ 2.14
Kdm3aQ6PCM1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Kdm3aQ6PCM1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Kdm3aQ6PCM1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Kdm3aQ6PCM1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.41■■■□□ 2.14
Kdm3aQ6PCM1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Kdm3aQ6PCM1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.4■■■□□ 2.14
Kdm3aQ6PCM1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Kdm3aQ6PCM1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.39■■■□□ 2.13
Kdm3aQ6PCM1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.39■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms