Protein–RNA interactions for Protein: Q62011

Pdpn, Podoplanin, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdpnQ62011 Peli2-204ENSMUST00000226513 1320 ntBASIC17.23■□□□□ 0.35
PdpnQ62011 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PdpnQ62011 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PdpnQ62011 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PdpnQ62011 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PdpnQ62011 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.22■□□□□ 0.35
PdpnQ62011 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.22■□□□□ 0.35
PdpnQ62011 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PdpnQ62011 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PdpnQ62011 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PdpnQ62011 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PdpnQ62011 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdpnQ62011 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PdpnQ62011 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PdpnQ62011 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdpnQ62011 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdpnQ62011 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdpnQ62011 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdpnQ62011 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdpnQ62011 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
PdpnQ62011 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PdpnQ62011 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PdpnQ62011 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdpnQ62011 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PdpnQ62011 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PdpnQ62011 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
PdpnQ62011 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PdpnQ62011 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PdpnQ62011 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PdpnQ62011 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PdpnQ62011 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PdpnQ62011 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
PdpnQ62011 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdpnQ62011 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.15■□□□□ 0.34
PdpnQ62011 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PdpnQ62011 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdpnQ62011 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdpnQ62011 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PdpnQ62011 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdpnQ62011 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdpnQ62011 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdpnQ62011 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PdpnQ62011 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PdpnQ62011 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PdpnQ62011 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
PdpnQ62011 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PdpnQ62011 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PdpnQ62011 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PdpnQ62011 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PdpnQ62011 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PdpnQ62011 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdpnQ62011 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PdpnQ62011 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdpnQ62011 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdpnQ62011 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PdpnQ62011 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PdpnQ62011 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdpnQ62011 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdpnQ62011 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdpnQ62011 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdpnQ62011 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdpnQ62011 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdpnQ62011 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PdpnQ62011 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PdpnQ62011 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.1■□□□□ 0.33
PdpnQ62011 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdpnQ62011 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PdpnQ62011 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PdpnQ62011 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PdpnQ62011 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PdpnQ62011 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdpnQ62011 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PdpnQ62011 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdpnQ62011 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdpnQ62011 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdpnQ62011 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdpnQ62011 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
PdpnQ62011 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdpnQ62011 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PdpnQ62011 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PdpnQ62011 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.08■□□□□ 0.32
PdpnQ62011 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.08■□□□□ 0.32
PdpnQ62011 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdpnQ62011 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PdpnQ62011 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdpnQ62011 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PdpnQ62011 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdpnQ62011 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.08■□□□□ 0.32
PdpnQ62011 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PdpnQ62011 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdpnQ62011 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdpnQ62011 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdpnQ62011 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PdpnQ62011 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdpnQ62011 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdpnQ62011 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.06■□□□□ 0.32
PdpnQ62011 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PdpnQ62011 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.06■□□□□ 0.32
PdpnQ62011 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PdpnQ62011 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms