Protein–RNA interactions for Protein: Q3ZN08

Fam220a, Protein FAM220A, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam220aQ3ZN08 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fam220aQ3ZN08 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Fam220aQ3ZN08 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fam220aQ3ZN08 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Fam220aQ3ZN08 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.62■□□□□ 0.73
Fam220aQ3ZN08 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fam220aQ3ZN08 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Fam220aQ3ZN08 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fam220aQ3ZN08 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fam220aQ3ZN08 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.61■□□□□ 0.73
Fam220aQ3ZN08 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fam220aQ3ZN08 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fam220aQ3ZN08 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Fam220aQ3ZN08 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fam220aQ3ZN08 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.59■□□□□ 0.73
Fam220aQ3ZN08 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Fam220aQ3ZN08 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Fam220aQ3ZN08 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Fam220aQ3ZN08 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Fam220aQ3ZN08 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fam220aQ3ZN08 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fam220aQ3ZN08 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fam220aQ3ZN08 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fam220aQ3ZN08 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.56■□□□□ 0.72
Fam220aQ3ZN08 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fam220aQ3ZN08 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fam220aQ3ZN08 Gm45855-201ENSMUST00000212546 880 ntBASIC19.55■□□□□ 0.72
Fam220aQ3ZN08 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fam220aQ3ZN08 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fam220aQ3ZN08 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fam220aQ3ZN08 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Fam220aQ3ZN08 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fam220aQ3ZN08 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Fam220aQ3ZN08 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam220aQ3ZN08 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam220aQ3ZN08 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Fam220aQ3ZN08 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.53■□□□□ 0.72
Fam220aQ3ZN08 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Fam220aQ3ZN08 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam220aQ3ZN08 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam220aQ3ZN08 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Fam220aQ3ZN08 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.51■□□□□ 0.71
Fam220aQ3ZN08 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam220aQ3ZN08 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.51■□□□□ 0.71
Fam220aQ3ZN08 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.51■□□□□ 0.71
Fam220aQ3ZN08 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam220aQ3ZN08 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Fam220aQ3ZN08 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam220aQ3ZN08 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam220aQ3ZN08 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam220aQ3ZN08 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam220aQ3ZN08 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam220aQ3ZN08 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Fam220aQ3ZN08 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Fam220aQ3ZN08 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam220aQ3ZN08 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam220aQ3ZN08 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Fam220aQ3ZN08 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
Fam220aQ3ZN08 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam220aQ3ZN08 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam220aQ3ZN08 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.47■□□□□ 0.71
Fam220aQ3ZN08 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Fam220aQ3ZN08 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam220aQ3ZN08 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Fam220aQ3ZN08 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fam220aQ3ZN08 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fam220aQ3ZN08 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Fam220aQ3ZN08 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam220aQ3ZN08 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fam220aQ3ZN08 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.45■□□□□ 0.7
Fam220aQ3ZN08 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fam220aQ3ZN08 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam220aQ3ZN08 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fam220aQ3ZN08 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.44■□□□□ 0.7
Fam220aQ3ZN08 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fam220aQ3ZN08 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Fam220aQ3ZN08 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fam220aQ3ZN08 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Fam220aQ3ZN08 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam220aQ3ZN08 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Fam220aQ3ZN08 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fam220aQ3ZN08 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fam220aQ3ZN08 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Fam220aQ3ZN08 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fam220aQ3ZN08 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fam220aQ3ZN08 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fam220aQ3ZN08 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.39■□□□□ 0.7
Fam220aQ3ZN08 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Fam220aQ3ZN08 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.39■□□□□ 0.69
Fam220aQ3ZN08 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Fam220aQ3ZN08 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fam220aQ3ZN08 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Fam220aQ3ZN08 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Fam220aQ3ZN08 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Fam220aQ3ZN08 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fam220aQ3ZN08 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Fam220aQ3ZN08 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fam220aQ3ZN08 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fam220aQ3ZN08 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.37■□□□□ 0.69
Fam220aQ3ZN08 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms