Protein–RNA interactions for Protein: Q3ULM0

Ccdc106, Coiled-coil domain-containing protein 106, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc106Q3ULM0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc106Q3ULM0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ccdc106Q3ULM0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc106Q3ULM0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc106Q3ULM0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc106Q3ULM0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ccdc106Q3ULM0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc106Q3ULM0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc106Q3ULM0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc106Q3ULM0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ccdc106Q3ULM0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc106Q3ULM0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc106Q3ULM0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc106Q3ULM0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ccdc106Q3ULM0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.42■■□□□ 1.02
Ccdc106Q3ULM0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc106Q3ULM0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc106Q3ULM0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc106Q3ULM0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc106Q3ULM0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc106Q3ULM0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccdc106Q3ULM0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccdc106Q3ULM0 Gm11599-201ENSMUST00000118720 878 ntBASIC21.4■■□□□ 1.02
Ccdc106Q3ULM0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc106Q3ULM0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ccdc106Q3ULM0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.4■■□□□ 1.02
Ccdc106Q3ULM0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc106Q3ULM0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc106Q3ULM0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc106Q3ULM0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc106Q3ULM0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ccdc106Q3ULM0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc106Q3ULM0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc106Q3ULM0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc106Q3ULM0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc106Q3ULM0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc106Q3ULM0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.37■■□□□ 1.01
Ccdc106Q3ULM0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.37■■□□□ 1.01
Ccdc106Q3ULM0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc106Q3ULM0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc106Q3ULM0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc106Q3ULM0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.36■■□□□ 1.01
Ccdc106Q3ULM0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.36■■□□□ 1.01
Ccdc106Q3ULM0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.36■■□□□ 1.01
Ccdc106Q3ULM0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc106Q3ULM0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc106Q3ULM0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.35■■□□□ 1.01
Ccdc106Q3ULM0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.35■■□□□ 1.01
Ccdc106Q3ULM0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ccdc106Q3ULM0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc106Q3ULM0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc106Q3ULM0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ccdc106Q3ULM0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc106Q3ULM0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc106Q3ULM0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc106Q3ULM0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc106Q3ULM0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.32■■□□□ 1
Ccdc106Q3ULM0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.31■■□□□ 1
Ccdc106Q3ULM0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc106Q3ULM0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc106Q3ULM0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.31■■□□□ 1
Ccdc106Q3ULM0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc106Q3ULM0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ccdc106Q3ULM0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
Ccdc106Q3ULM0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ccdc106Q3ULM0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ccdc106Q3ULM0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.29■■□□□ 1
Ccdc106Q3ULM0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc106Q3ULM0 Gm30023-201ENSMUST00000197970 889 ntBASIC21.28■■□□□ 1
Ccdc106Q3ULM0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc106Q3ULM0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc106Q3ULM0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc106Q3ULM0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc106Q3ULM0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc106Q3ULM0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc106Q3ULM0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.27■□□□□ 0.99
Ccdc106Q3ULM0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc106Q3ULM0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc106Q3ULM0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc106Q3ULM0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc106Q3ULM0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc106Q3ULM0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc106Q3ULM0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc106Q3ULM0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc106Q3ULM0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc106Q3ULM0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccdc106Q3ULM0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc106Q3ULM0 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.22■□□□□ 0.99
Ccdc106Q3ULM0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc106Q3ULM0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc106Q3ULM0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc106Q3ULM0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc106Q3ULM0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc106Q3ULM0 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.21■□□□□ 0.99
Ccdc106Q3ULM0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc106Q3ULM0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc106Q3ULM0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ccdc106Q3ULM0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ccdc106Q3ULM0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc106Q3ULM0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms