Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Ssbp4Q3U4B1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ssbp4Q3U4B1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssbp4Q3U4B1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ssbp4Q3U4B1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.91■□□□□ 0.78
Ssbp4Q3U4B1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssbp4Q3U4B1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssbp4Q3U4B1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssbp4Q3U4B1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.89■□□□□ 0.77
Ssbp4Q3U4B1 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.88■□□□□ 0.77
Ssbp4Q3U4B1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssbp4Q3U4B1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssbp4Q3U4B1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ssbp4Q3U4B1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ssbp4Q3U4B1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ssbp4Q3U4B1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ssbp4Q3U4B1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ssbp4Q3U4B1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Ssbp4Q3U4B1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssbp4Q3U4B1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssbp4Q3U4B1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ssbp4Q3U4B1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ssbp4Q3U4B1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssbp4Q3U4B1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssbp4Q3U4B1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ssbp4Q3U4B1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Ssbp4Q3U4B1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.85■□□□□ 0.77
Ssbp4Q3U4B1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Ssbp4Q3U4B1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.83■□□□□ 0.77
Ssbp4Q3U4B1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Ssbp4Q3U4B1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.82■□□□□ 0.76
Ssbp4Q3U4B1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssbp4Q3U4B1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ssbp4Q3U4B1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssbp4Q3U4B1 Gm4799-201ENSMUST00000095396 657 ntBASIC19.81■□□□□ 0.76
Ssbp4Q3U4B1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssbp4Q3U4B1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssbp4Q3U4B1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssbp4Q3U4B1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ssbp4Q3U4B1 Mir6538-201ENSMUST00000183713 110 ntBASIC19.8■□□□□ 0.76
Ssbp4Q3U4B1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.8■□□□□ 0.76
Ssbp4Q3U4B1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Ssbp4Q3U4B1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.8■□□□□ 0.76
Ssbp4Q3U4B1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ssbp4Q3U4B1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssbp4Q3U4B1 Gm37136-201ENSMUST00000194368 194 ntBASIC19.79■□□□□ 0.76
Ssbp4Q3U4B1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ssbp4Q3U4B1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.78■□□□□ 0.76
Ssbp4Q3U4B1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssbp4Q3U4B1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssbp4Q3U4B1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssbp4Q3U4B1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ssbp4Q3U4B1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssbp4Q3U4B1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssbp4Q3U4B1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssbp4Q3U4B1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ssbp4Q3U4B1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssbp4Q3U4B1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssbp4Q3U4B1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssbp4Q3U4B1 Gm11175-201ENSMUST00000116172 543 ntBASIC19.76■□□□□ 0.75
Ssbp4Q3U4B1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.76■□□□□ 0.75
Ssbp4Q3U4B1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ssbp4Q3U4B1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssbp4Q3U4B1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssbp4Q3U4B1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssbp4Q3U4B1 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.74■□□□□ 0.75
Ssbp4Q3U4B1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ssbp4Q3U4B1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssbp4Q3U4B1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.73■□□□□ 0.75
Ssbp4Q3U4B1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssbp4Q3U4B1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssbp4Q3U4B1 Mir3960-201ENSMUST00000198213 73 ntBASIC19.72■□□□□ 0.75
Ssbp4Q3U4B1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssbp4Q3U4B1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ssbp4Q3U4B1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssbp4Q3U4B1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssbp4Q3U4B1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssbp4Q3U4B1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ssbp4Q3U4B1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssbp4Q3U4B1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ssbp4Q3U4B1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ssbp4Q3U4B1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.7■□□□□ 0.74
Ssbp4Q3U4B1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ssbp4Q3U4B1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Ssbp4Q3U4B1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ssbp4Q3U4B1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ssbp4Q3U4B1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ssbp4Q3U4B1 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.68■□□□□ 0.74
Ssbp4Q3U4B1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ssbp4Q3U4B1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ssbp4Q3U4B1 Amer2-203ENSMUST00000225247 2662 ntBASIC19.67■□□□□ 0.74
Ssbp4Q3U4B1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.67■□□□□ 0.74
Ssbp4Q3U4B1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ssbp4Q3U4B1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ssbp4Q3U4B1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ssbp4Q3U4B1 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.66■□□□□ 0.74
Ssbp4Q3U4B1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ssbp4Q3U4B1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.65■□□□□ 0.74
Ssbp4Q3U4B1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssbp4Q3U4B1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms