Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.29■■□□□ 1.16
Khdc4Q3TCX3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Khdc4Q3TCX3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.27■■□□□ 1.16
Khdc4Q3TCX3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Khdc4Q3TCX3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Khdc4Q3TCX3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Khdc4Q3TCX3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Khdc4Q3TCX3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Khdc4Q3TCX3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.26■■□□□ 1.15
Khdc4Q3TCX3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Khdc4Q3TCX3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Khdc4Q3TCX3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Khdc4Q3TCX3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Khdc4Q3TCX3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Khdc4Q3TCX3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Khdc4Q3TCX3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Khdc4Q3TCX3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Khdc4Q3TCX3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Khdc4Q3TCX3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Khdc4Q3TCX3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Khdc4Q3TCX3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Khdc4Q3TCX3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Khdc4Q3TCX3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Khdc4Q3TCX3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Khdc4Q3TCX3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Khdc4Q3TCX3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Khdc4Q3TCX3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Khdc4Q3TCX3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Khdc4Q3TCX3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Khdc4Q3TCX3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Khdc4Q3TCX3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Khdc4Q3TCX3 Gm30023-201ENSMUST00000197970 889 ntBASIC22.2■■□□□ 1.14
Khdc4Q3TCX3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Khdc4Q3TCX3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Khdc4Q3TCX3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Khdc4Q3TCX3 Gm11175-201ENSMUST00000116172 543 ntBASIC22.19■■□□□ 1.14
Khdc4Q3TCX3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Khdc4Q3TCX3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Khdc4Q3TCX3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.18■■□□□ 1.14
Khdc4Q3TCX3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Khdc4Q3TCX3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Khdc4Q3TCX3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Khdc4Q3TCX3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Khdc4Q3TCX3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Khdc4Q3TCX3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Khdc4Q3TCX3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Khdc4Q3TCX3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Khdc4Q3TCX3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Khdc4Q3TCX3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Khdc4Q3TCX3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Khdc4Q3TCX3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.15■■□□□ 1.14
Khdc4Q3TCX3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.15■■□□□ 1.14
Khdc4Q3TCX3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Khdc4Q3TCX3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Khdc4Q3TCX3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Khdc4Q3TCX3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Khdc4Q3TCX3 Mir6538-201ENSMUST00000183713 110 ntBASIC22.14■■□□□ 1.13
Khdc4Q3TCX3 Gm6311-201ENSMUST00000073790 878 ntBASIC22.14■■□□□ 1.13
Khdc4Q3TCX3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Khdc4Q3TCX3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Khdc4Q3TCX3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Khdc4Q3TCX3 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.12■■□□□ 1.13
Khdc4Q3TCX3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Khdc4Q3TCX3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Khdc4Q3TCX3 Particl-201ENSMUST00000205370 1560 ntBASIC22.11■■□□□ 1.13
Khdc4Q3TCX3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Khdc4Q3TCX3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
Khdc4Q3TCX3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.1■■□□□ 1.13
Khdc4Q3TCX3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Khdc4Q3TCX3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Khdc4Q3TCX3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.09■■□□□ 1.13
Khdc4Q3TCX3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Khdc4Q3TCX3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Khdc4Q3TCX3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Khdc4Q3TCX3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Khdc4Q3TCX3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Khdc4Q3TCX3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Khdc4Q3TCX3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Khdc4Q3TCX3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Khdc4Q3TCX3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Khdc4Q3TCX3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Khdc4Q3TCX3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Khdc4Q3TCX3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Khdc4Q3TCX3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Khdc4Q3TCX3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.03■■□□□ 1.12
Khdc4Q3TCX3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Khdc4Q3TCX3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Khdc4Q3TCX3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.01■■□□□ 1.11
Khdc4Q3TCX3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Khdc4Q3TCX3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Khdc4Q3TCX3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Khdc4Q3TCX3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Khdc4Q3TCX3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Khdc4Q3TCX3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Khdc4Q3TCX3 Cap2-205ENSMUST00000225824 1634 ntBASIC21.98■■□□□ 1.11
Khdc4Q3TCX3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Khdc4Q3TCX3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Khdc4Q3TCX3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Khdc4Q3TCX3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Khdc4Q3TCX3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms