Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim63Q38HM4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim63Q38HM4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim63Q38HM4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim63Q38HM4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim63Q38HM4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim63Q38HM4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim63Q38HM4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim63Q38HM4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim63Q38HM4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim63Q38HM4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Trim63Q38HM4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim63Q38HM4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trim63Q38HM4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim63Q38HM4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim63Q38HM4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim63Q38HM4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim63Q38HM4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim63Q38HM4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim63Q38HM4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim63Q38HM4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim63Q38HM4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim63Q38HM4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim63Q38HM4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.5■□□□□ 0.71
Trim63Q38HM4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim63Q38HM4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim63Q38HM4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim63Q38HM4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Trim63Q38HM4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim63Q38HM4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim63Q38HM4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim63Q38HM4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim63Q38HM4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim63Q38HM4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim63Q38HM4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim63Q38HM4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim63Q38HM4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim63Q38HM4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim63Q38HM4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Trim63Q38HM4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim63Q38HM4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim63Q38HM4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim63Q38HM4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim63Q38HM4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim63Q38HM4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim63Q38HM4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim63Q38HM4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim63Q38HM4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim63Q38HM4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim63Q38HM4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim63Q38HM4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim63Q38HM4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim63Q38HM4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim63Q38HM4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim63Q38HM4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim63Q38HM4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim63Q38HM4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim63Q38HM4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim63Q38HM4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim63Q38HM4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim63Q38HM4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim63Q38HM4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim63Q38HM4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim63Q38HM4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim63Q38HM4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Trim63Q38HM4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim63Q38HM4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim63Q38HM4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim63Q38HM4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim63Q38HM4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim63Q38HM4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim63Q38HM4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.39■□□□□ 0.69
Trim63Q38HM4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim63Q38HM4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim63Q38HM4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim63Q38HM4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim63Q38HM4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim63Q38HM4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim63Q38HM4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim63Q38HM4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim63Q38HM4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim63Q38HM4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim63Q38HM4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim63Q38HM4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim63Q38HM4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim63Q38HM4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim63Q38HM4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim63Q38HM4 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.35■□□□□ 0.69
Trim63Q38HM4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim63Q38HM4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim63Q38HM4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim63Q38HM4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim63Q38HM4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim63Q38HM4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim63Q38HM4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Trim63Q38HM4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim63Q38HM4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim63Q38HM4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim63Q38HM4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim63Q38HM4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 139.3 ms