Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 tD(GUC)BtD(GUC)B 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)DtD(GUC)D 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)G1tD(GUC)G1 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)G2tD(GUC)G2 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)I1tD(GUC)I1 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)I2tD(GUC)I2 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)J1tD(GUC)J1 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)J2tD(GUC)J2 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)J3tD(GUC)J3 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)J4tD(GUC)J4 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)KtD(GUC)K 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)L1tD(GUC)L1 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)L2tD(GUC)L2 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)MtD(GUC)M 72 nt7.77□□□□□ -1.17
CTK1Q03957 tD(GUC)OtD(GUC)O 72 nt7.77□□□□□ -1.17
CTK1Q03957 tE(CUC)DtE(CUC)D 72 nt7.77□□□□□ -1.17
CTK1Q03957 tE(CUC)ItE(CUC)I 72 nt7.77□□□□□ -1.17
CTK1Q03957 GRH1YDR517W 1119 nt7.77□□□□□ -1.17
CTK1Q03957 MIM1YOL026C 342 nt7.77□□□□□ -1.17
CTK1Q03957 MEX67YPL169C 1800 nt7.76□□□□□ -1.17
CTK1Q03957 CAK1YFL029C 1107 nt7.76□□□□□ -1.17
CTK1Q03957 MET22YOL064C 1074 nt7.76□□□□□ -1.17
CTK1Q03957 RNA170RNA170 169 nt7.75□□□□□ -1.17
CTK1Q03957 YNL067W-AYNL067W-A 147 nt7.75□□□□□ -1.17
CTK1Q03957 OCH1YGL038C 1443 nt7.75□□□□□ -1.17
CTK1Q03957 UTR5YEL035C 501 nt7.74□□□□□ -1.17
CTK1Q03957 FET5YFL041W 1869 nt7.74□□□□□ -1.17
CTK1Q03957 YDR306CYDR306C 1437 nt7.73□□□□□ -1.17
CTK1Q03957 FAF1YIL019W 1041 nt7.73□□□□□ -1.17
CTK1Q03957 YLR460CYLR460C 1131 nt7.73□□□□□ -1.17
CTK1Q03957 YOR343CYOR343C 327 nt7.73□□□□□ -1.17
CTK1Q03957 RRT14YIL127C 621 nt7.72□□□□□ -1.17
CTK1Q03957 PUS5YLR165C 765 nt7.72□□□□□ -1.17
CTK1Q03957 MTO1YGL236C 2010 nt7.71□□□□□ -1.17
CTK1Q03957 YBL095WYBL095W 813 nt7.71□□□□□ -1.18
CTK1Q03957 AAC3YBR085W 924 nt7.71□□□□□ -1.18
CTK1Q03957 YER156CYER156C 1017 nt7.7□□□□□ -1.18
CTK1Q03957 CHS7YHR142W 951 nt7.7□□□□□ -1.18
CTK1Q03957 PDC6YGR087C 1692 nt7.7□□□□□ -1.18
CTK1Q03957 HRA1HRA1 564 nt7.69□□□□□ -1.18
CTK1Q03957 YJR149WYJR149W 1215 nt7.69□□□□□ -1.18
CTK1Q03957 ADA2YDR448W 1305 nt7.69□□□□□ -1.18
CTK1Q03957 TMS1YDR105C 1422 nt7.69□□□□□ -1.18
CTK1Q03957 HBS1YKR084C 1836 nt7.68□□□□□ -1.18
CTK1Q03957 TRP2YER090W 1524 nt7.68□□□□□ -1.18
CTK1Q03957 BXI1YNL305C 894 nt7.68□□□□□ -1.18
CTK1Q03957 RPS6AYPL090C 711 nt7.68□□□□□ -1.18
CTK1Q03957 RPS6BYBR181C 711 nt7.68□□□□□ -1.18
CTK1Q03957 KDX1YKL161C 1302 nt7.68□□□□□ -1.18
CTK1Q03957 MDL2YPL270W 2322 nt7.68□□□□□ -1.18
CTK1Q03957 MRP1YDR347W 966 nt7.67□□□□□ -1.18
CTK1Q03957 THI6YPL214C 1623 nt7.67□□□□□ -1.18
CTK1Q03957 BNS1YGR230W 414 nt7.66□□□□□ -1.18
CTK1Q03957 YMC2YBR104W 990 nt7.66□□□□□ -1.18
CTK1Q03957 YIR035CYIR035C 765 nt7.65□□□□□ -1.18
CTK1Q03957 MFT1YML062C 1179 nt7.65□□□□□ -1.18
CTK1Q03957 ORT1YOR130C 879 nt7.65□□□□□ -1.18
CTK1Q03957 OLA1YBR025C 1185 nt7.65□□□□□ -1.18
CTK1Q03957 AAT1YKL106W 1356 nt7.64□□□□□ -1.19
CTK1Q03957 tL(UAA)B1tL(UAA)B1 84 nt7.64□□□□□ -1.19
CTK1Q03957 tL(UAA)B2tL(UAA)B2 84 nt7.64□□□□□ -1.19
CTK1Q03957 tL(UAA)DtL(UAA)D 84 nt7.64□□□□□ -1.19
CTK1Q03957 SUP51tL(UAA)J 84 nt7.64□□□□□ -1.19
CTK1Q03957 tL(UAA)KtL(UAA)K 84 nt7.64□□□□□ -1.19
CTK1Q03957 tL(UAA)LtL(UAA)L 84 nt7.64□□□□□ -1.19
CTK1Q03957 tL(UAA)NtL(UAA)N 84 nt7.64□□□□□ -1.19
CTK1Q03957 YAL016C-AYAL016C-A 315 nt7.64□□□□□ -1.19
CTK1Q03957 MRS4YKR052C 915 nt7.64□□□□□ -1.19
CTK1Q03957 HXT11YOL156W 1704 nt7.64□□□□□ -1.19
CTK1Q03957 GDH1YOR375C 1365 nt7.63□□□□□ -1.19
CTK1Q03957 FHN1YGR131W 525 nt7.63□□□□□ -1.19
CTK1Q03957 BUB2YMR055C 921 nt7.63□□□□□ -1.19
CTK1Q03957 YBR056WYBR056W 1506 nt7.62□□□□□ -1.19
CTK1Q03957 PUS7YOR243C 2031 nt7.62□□□□□ -1.19
CTK1Q03957 ELP4YPL101W 1371 nt7.62□□□□□ -1.19
CTK1Q03957 RPL12BYDR418W 498 nt7.62□□□□□ -1.19
CTK1Q03957 REC114YMR133W 1287 nt7.62□□□□□ -1.19
CTK1Q03957 RHO1YPR165W 630 nt7.61□□□□□ -1.19
CTK1Q03957 SHC1YER096W 1539 nt7.61□□□□□ -1.19
CTK1Q03957 YIL177CYIL177C 5277 nt7.61□□□□□ -1.19
CTK1Q03957 TPN1YGL186C 1740 nt7.61□□□□□ -1.19
CTK1Q03957 MCM5YLR274W 2328 nt7.6□□□□□ -1.19
CTK1Q03957 TAD2YJL035C 753 nt7.6□□□□□ -1.19
CTK1Q03957 ATG17YLR423C 1254 nt7.6□□□□□ -1.19
CTK1Q03957 ATP2YJR121W 1536 nt7.6□□□□□ -1.19
CTK1Q03957 YJL009WYJL009W 327 nt7.59□□□□□ -1.19
CTK1Q03957 YHM2YMR241W 945 nt7.59□□□□□ -1.19
CTK1Q03957 MEP1YGR121C 1479 nt7.59□□□□□ -1.19
CTK1Q03957 YPR084WYPR084W 1371 nt7.59□□□□□ -1.2
CTK1Q03957 snR86snR86 1004 nt7.58□□□□□ -1.2
CTK1Q03957 KAE1YKR038C 1161 nt7.58□□□□□ -1.2
CTK1Q03957 snR4snR4 186 nt7.58□□□□□ -1.2
CTK1Q03957 DUR3YHL016C 2208 nt7.58□□□□□ -1.2
CTK1Q03957 SRM1YGL097W 1449 nt7.57□□□□□ -1.2
CTK1Q03957 THI73YLR004C 1572 nt7.57□□□□□ -1.2
CTK1Q03957 FRA1YLL029W 2250 nt7.56□□□□□ -1.2
CTK1Q03957 YPT31YER031C 672 nt7.56□□□□□ -1.2
CTK1Q03957 ADE1YAR015W 921 nt7.56□□□□□ -1.2
CTK1Q03957 YMR206WYMR206W 942 nt7.56□□□□□ -1.2
CTK1Q03957 YRF1-3YGR296W 5580 nt7.56□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 27 ms