Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Gm45364-201ENSMUST00000210883 159 ntBASIC20.3■□□□□ 0.84
Ccl21aP84444 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccl21aP84444 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccl21aP84444 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccl21aP84444 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ccl21aP84444 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccl21aP84444 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccl21aP84444 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
Ccl21aP84444 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccl21aP84444 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccl21aP84444 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccl21aP84444 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccl21aP84444 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccl21aP84444 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl21aP84444 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl21aP84444 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl21aP84444 Gm14523-201ENSMUST00000117260 558 ntBASIC20.24■□□□□ 0.83
Ccl21aP84444 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl21aP84444 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl21aP84444 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl21aP84444 Gm5812-201ENSMUST00000061073 957 ntBASIC20.23■□□□□ 0.83
Ccl21aP84444 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccl21aP84444 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.22■□□□□ 0.83
Ccl21aP84444 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ccl21aP84444 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.21■□□□□ 0.83
Ccl21aP84444 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccl21aP84444 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Ccl21aP84444 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccl21aP84444 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccl21aP84444 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.2■□□□□ 0.82
Ccl21aP84444 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl21aP84444 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl21aP84444 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Ccl21aP84444 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccl21aP84444 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccl21aP84444 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccl21aP84444 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccl21aP84444 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Ccl21aP84444 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.16■□□□□ 0.82
Ccl21aP84444 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccl21aP84444 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccl21aP84444 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccl21aP84444 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccl21aP84444 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ccl21aP84444 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.14■□□□□ 0.81
Ccl21aP84444 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccl21aP84444 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccl21aP84444 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccl21aP84444 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccl21aP84444 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccl21aP84444 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.12■□□□□ 0.81
Ccl21aP84444 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ccl21aP84444 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccl21aP84444 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccl21aP84444 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccl21aP84444 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccl21aP84444 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccl21aP84444 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.1■□□□□ 0.81
Ccl21aP84444 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.1■□□□□ 0.81
Ccl21aP84444 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccl21aP84444 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccl21aP84444 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccl21aP84444 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccl21aP84444 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccl21aP84444 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccl21aP84444 Gm37136-201ENSMUST00000194368 194 ntBASIC20.08■□□□□ 0.81
Ccl21aP84444 Gm5921-201ENSMUST00000075898 882 ntBASIC20.08■□□□□ 0.81
Ccl21aP84444 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccl21aP84444 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl21aP84444 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl21aP84444 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl21aP84444 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl21aP84444 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl21aP84444 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl21aP84444 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.06■□□□□ 0.8
Ccl21aP84444 Gm10420-201ENSMUST00000121713 882 ntBASIC20.06■□□□□ 0.8
Ccl21aP84444 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccl21aP84444 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccl21aP84444 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccl21aP84444 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.05■□□□□ 0.8
Ccl21aP84444 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccl21aP84444 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccl21aP84444 Gm15546-201ENSMUST00000122095 826 ntBASIC20.04■□□□□ 0.8
Ccl21aP84444 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.04■□□□□ 0.8
Ccl21aP84444 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.04■□□□□ 0.8
Ccl21aP84444 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccl21aP84444 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccl21aP84444 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccl21aP84444 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccl21aP84444 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccl21aP84444 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccl21aP84444 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccl21aP84444 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccl21aP84444 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.01■□□□□ 0.79
Ccl21aP84444 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.01■□□□□ 0.79
Ccl21aP84444 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccl21aP84444 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccl21aP84444 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccl21aP84444 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccl21aP84444 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 126 ms