Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
SgcgP82348 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SgcgP82348 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
SgcgP82348 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SgcgP82348 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SgcgP82348 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SgcgP82348 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SgcgP82348 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.38■■□□□ 1.33
SgcgP82348 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SgcgP82348 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.37■■□□□ 1.33
SgcgP82348 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SgcgP82348 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SgcgP82348 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SgcgP82348 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SgcgP82348 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SgcgP82348 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SgcgP82348 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SgcgP82348 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SgcgP82348 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
SgcgP82348 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SgcgP82348 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SgcgP82348 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SgcgP82348 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
SgcgP82348 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.3■■□□□ 1.32
SgcgP82348 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SgcgP82348 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SgcgP82348 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SgcgP82348 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.29■■□□□ 1.32
SgcgP82348 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SgcgP82348 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
SgcgP82348 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
SgcgP82348 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.26■■□□□ 1.31
SgcgP82348 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SgcgP82348 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SgcgP82348 Gm6311-201ENSMUST00000073790 878 ntBASIC23.26■■□□□ 1.31
SgcgP82348 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SgcgP82348 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.26■■□□□ 1.31
SgcgP82348 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SgcgP82348 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SgcgP82348 Gm11175-201ENSMUST00000116172 543 ntBASIC23.25■■□□□ 1.31
SgcgP82348 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.25■■□□□ 1.31
SgcgP82348 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SgcgP82348 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
SgcgP82348 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SgcgP82348 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
SgcgP82348 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SgcgP82348 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SgcgP82348 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SgcgP82348 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SgcgP82348 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SgcgP82348 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SgcgP82348 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SgcgP82348 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.18■■□□□ 1.3
SgcgP82348 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SgcgP82348 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SgcgP82348 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SgcgP82348 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SgcgP82348 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SgcgP82348 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SgcgP82348 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SgcgP82348 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SgcgP82348 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SgcgP82348 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SgcgP82348 Gm37136-201ENSMUST00000194368 194 ntBASIC23.16■■□□□ 1.3
SgcgP82348 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SgcgP82348 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SgcgP82348 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SgcgP82348 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SgcgP82348 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SgcgP82348 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SgcgP82348 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.15■■□□□ 1.3
SgcgP82348 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.15■■□□□ 1.3
SgcgP82348 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SgcgP82348 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SgcgP82348 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SgcgP82348 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SgcgP82348 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SgcgP82348 Gm4799-201ENSMUST00000095396 657 ntBASIC23.12■■□□□ 1.29
SgcgP82348 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.11■■□□□ 1.29
SgcgP82348 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SgcgP82348 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.1■■□□□ 1.29
SgcgP82348 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SgcgP82348 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.1■■□□□ 1.29
SgcgP82348 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SgcgP82348 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
SgcgP82348 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SgcgP82348 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SgcgP82348 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SgcgP82348 Mir6538-201ENSMUST00000183713 110 ntBASIC23.06■■□□□ 1.28
SgcgP82348 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.05■■□□□ 1.28
SgcgP82348 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SgcgP82348 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SgcgP82348 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SgcgP82348 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SgcgP82348 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SgcgP82348 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SgcgP82348 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SgcgP82348 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SgcgP82348 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SgcgP82348 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms