Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Atf1P81269 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atf1P81269 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Atf1P81269 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf1P81269 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.36■□□□□ 0.85
Atf1P81269 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.36■□□□□ 0.85
Atf1P81269 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf1P81269 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Atf1P81269 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Atf1P81269 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Atf1P81269 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atf1P81269 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Atf1P81269 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.34■□□□□ 0.85
Atf1P81269 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Atf1P81269 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Atf1P81269 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf1P81269 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf1P81269 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atf1P81269 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atf1P81269 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf1P81269 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf1P81269 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf1P81269 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atf1P81269 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf1P81269 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf1P81269 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atf1P81269 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atf1P81269 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atf1P81269 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Atf1P81269 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf1P81269 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atf1P81269 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.28■□□□□ 0.84
Atf1P81269 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atf1P81269 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf1P81269 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf1P81269 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf1P81269 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atf1P81269 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Atf1P81269 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Atf1P81269 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf1P81269 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf1P81269 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atf1P81269 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atf1P81269 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.26■□□□□ 0.83
Atf1P81269 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Atf1P81269 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atf1P81269 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atf1P81269 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf1P81269 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf1P81269 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atf1P81269 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.25■□□□□ 0.83
Atf1P81269 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atf1P81269 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf1P81269 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf1P81269 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.23■□□□□ 0.83
Atf1P81269 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf1P81269 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf1P81269 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.22■□□□□ 0.83
Atf1P81269 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.22■□□□□ 0.83
Atf1P81269 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atf1P81269 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf1P81269 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf1P81269 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Atf1P81269 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf1P81269 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf1P81269 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf1P81269 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf1P81269 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Atf1P81269 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atf1P81269 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf1P81269 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf1P81269 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf1P81269 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf1P81269 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf1P81269 Particl-201ENSMUST00000205370 1560 ntBASIC20.17■□□□□ 0.82
Atf1P81269 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf1P81269 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atf1P81269 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf1P81269 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atf1P81269 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf1P81269 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atf1P81269 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atf1P81269 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atf1P81269 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
Atf1P81269 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atf1P81269 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Atf1P81269 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf1P81269 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atf1P81269 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atf1P81269 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Atf1P81269 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Atf1P81269 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Atf1P81269 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Atf1P81269 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atf1P81269 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Atf1P81269 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.09■□□□□ 0.81
Atf1P81269 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf1P81269 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atf1P81269 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Atf1P81269 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms