Protein–RNA interactions for Protein: P53064

RTF1, RNA polymerase-associated protein RTF1, yeastyeast

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTF1P53064 NEM1YHR004C 1341 nt10.54□□□□□ -0.72
RTF1P53064 SSL2YIL143C 2532 nt10.53□□□□□ -0.72
RTF1P53064 CHS7YHR142W 951 nt10.53□□□□□ -0.72
RTF1P53064 AIR1YIL079C 1083 nt10.53□□□□□ -0.72
RTF1P53064 YMR306C-AYMR306C-A 390 nt10.53□□□□□ -0.72
RTF1P53064 YOR268CYOR268C 399 nt10.53□□□□□ -0.72
RTF1P53064 KTR3YBR205W 1215 nt10.52□□□□□ -0.73
RTF1P53064 ADA2YDR448W 1305 nt10.52□□□□□ -0.73
RTF1P53064 OCH1YGL038C 1443 nt10.51□□□□□ -0.73
RTF1P53064 FAF1YIL019W 1041 nt10.51□□□□□ -0.73
RTF1P53064 YAL016C-BYAL016C-B 186 nt10.51□□□□□ -0.73
RTF1P53064 UTR5YEL035C 501 nt10.5□□□□□ -0.73
RTF1P53064 GGA2YHR108W 1758 nt10.49□□□□□ -0.73
RTF1P53064 tL(UAA)B1tL(UAA)B1 84 nt10.49□□□□□ -0.73
RTF1P53064 tL(UAA)B2tL(UAA)B2 84 nt10.49□□□□□ -0.73
RTF1P53064 tL(UAA)DtL(UAA)D 84 nt10.49□□□□□ -0.73
RTF1P53064 SUP51tL(UAA)J 84 nt10.49□□□□□ -0.73
RTF1P53064 tL(UAA)KtL(UAA)K 84 nt10.49□□□□□ -0.73
RTF1P53064 tL(UAA)LtL(UAA)L 84 nt10.49□□□□□ -0.73
RTF1P53064 tL(UAA)NtL(UAA)N 84 nt10.49□□□□□ -0.73
RTF1P53064 FHN1YGR131W 525 nt10.49□□□□□ -0.73
RTF1P53064 MET22YOL064C 1074 nt10.49□□□□□ -0.73
RTF1P53064 OLA1YBR025C 1185 nt10.49□□□□□ -0.73
RTF1P53064 YER156CYER156C 1017 nt10.48□□□□□ -0.73
RTF1P53064 NAT5YOR253W 531 nt10.48□□□□□ -0.73
RTF1P53064 ODC1YPL134C 933 nt10.48□□□□□ -0.73
RTF1P53064 HEL2YDR266C 1920 nt10.48□□□□□ -0.73
RTF1P53064 MPC1YGL080W 393 nt10.47□□□□□ -0.73
RTF1P53064 TAD2YJL035C 753 nt10.47□□□□□ -0.73
RTF1P53064 STD1YOR047C 1335 nt10.47□□□□□ -0.73
RTF1P53064 APM1YPL259C 1428 nt10.47□□□□□ -0.73
RTF1P53064 YMR316C-BYMR316C-B 309 nt10.46□□□□□ -0.73
RTF1P53064 AIM41YOR215C 558 nt10.46□□□□□ -0.73
RTF1P53064 BNA3YJL060W 1335 nt10.46□□□□□ -0.73
RTF1P53064 YPR084WYPR084W 1371 nt10.46□□□□□ -0.74
RTF1P53064 Q0255Q0255 1419 nt10.46□□□□□ -0.74
RTF1P53064 DPL1YDR294C 1770 nt10.46□□□□□ -0.74
RTF1P53064 EDC2YER035W 438 nt10.45□□□□□ -0.74
RTF1P53064 ICE2YIL090W 1476 nt10.44□□□□□ -0.74
RTF1P53064 ELP4YPL101W 1371 nt10.44□□□□□ -0.74
RTF1P53064 YJR149WYJR149W 1215 nt10.44□□□□□ -0.74
RTF1P53064 YLR036CYLR036C 612 nt10.44□□□□□ -0.74
RTF1P53064 YML079WYML079W 606 nt10.44□□□□□ -0.74
RTF1P53064 THI3YDL080C 1830 nt10.44□□□□□ -0.74
RTF1P53064 ATP6Q0085 780 nt10.43□□□□□ -0.74
RTF1P53064 KAE1YKR038C 1161 nt10.43□□□□□ -0.74
RTF1P53064 MRPL36YBR122C 534 nt10.43□□□□□ -0.74
RTF1P53064 PDC6YGR087C 1692 nt10.42□□□□□ -0.74
RTF1P53064 GPM1YKL152C 744 nt10.42□□□□□ -0.74
RTF1P53064 SWP1YMR149W 861 nt10.42□□□□□ -0.74
RTF1P53064 RPS6AYPL090C 711 nt10.42□□□□□ -0.74
RTF1P53064 RPS6BYBR181C 711 nt10.42□□□□□ -0.74
RTF1P53064 YMR147WYMR147W 672 nt10.41□□□□□ -0.74
RTF1P53064 YMR206WYMR206W 942 nt10.41□□□□□ -0.74
RTF1P53064 BXI1YNL305C 894 nt10.41□□□□□ -0.74
RTF1P53064 YDR467CYDR467C 327 nt10.39□□□□□ -0.75
RTF1P53064 YIR035CYIR035C 765 nt10.39□□□□□ -0.75
RTF1P53064 MFG1YDL233W 1377 nt10.39□□□□□ -0.75
RTF1P53064 YPT31YER031C 672 nt10.38□□□□□ -0.75
RTF1P53064 MDM35YKL053C-A 261 nt10.38□□□□□ -0.75
RTF1P53064 TOS1YBR162C 1368 nt10.38□□□□□ -0.75
RTF1P53064 YGL188CYGL188C 174 nt10.37□□□□□ -0.75
RTF1P53064 RNA170RNA170 169 nt10.37□□□□□ -0.75
RTF1P53064 YNL234WYNL234W 1281 nt10.37□□□□□ -0.75
RTF1P53064 SCO2YBR024W 906 nt10.37□□□□□ -0.75
RTF1P53064 TDH1YJL052W 999 nt10.36□□□□□ -0.75
RTF1P53064 tR(UCU)Q1tR(UCU)Q1 73 nt10.35□□□□□ -0.75
RTF1P53064 ADE1YAR015W 921 nt10.35□□□□□ -0.75
RTF1P53064 LEU4YNL104C 1860 nt10.34□□□□□ -0.75
RTF1P53064 UBC12YLR306W 567 nt10.34□□□□□ -0.75
RTF1P53064 BSP1YPR171W 1731 nt10.33□□□□□ -0.76
RTF1P53064 ATP2YJR121W 1536 nt10.33□□□□□ -0.76
RTF1P53064 GET2YER083C 858 nt10.32□□□□□ -0.76
RTF1P53064 TMS1YDR105C 1422 nt10.32□□□□□ -0.76
RTF1P53064 PCL10YGL134W 1302 nt10.32□□□□□ -0.76
RTF1P53064 KDX1YKL161C 1302 nt10.32□□□□□ -0.76
RTF1P53064 COX16YJL003W 357 nt10.31□□□□□ -0.76
RTF1P53064 YJL043WYJL043W 774 nt10.31□□□□□ -0.76
RTF1P53064 BUB2YMR055C 921 nt10.31□□□□□ -0.76
RTF1P53064 RHO1YPR165W 630 nt10.31□□□□□ -0.76
RTF1P53064 AAC3YBR085W 924 nt10.31□□□□□ -0.76
RTF1P53064 ARC19YKL013C 516 nt10.3□□□□□ -0.76
RTF1P53064 YBL095WYBL095W 813 nt10.3□□□□□ -0.76
RTF1P53064 FUS3YBL016W 1062 nt10.29□□□□□ -0.76
RTF1P53064 PEX27YOR193W 1131 nt10.29□□□□□ -0.76
RTF1P53064 YMC2YBR104W 990 nt10.29□□□□□ -0.76
RTF1P53064 NUP53YMR153W 1428 nt10.28□□□□□ -0.76
RTF1P53064 YOR169CYOR169C 465 nt10.28□□□□□ -0.76
RTF1P53064 PET494YNR045W 1470 nt10.28□□□□□ -0.76
RTF1P53064 INH1YDL181W 258 nt10.27□□□□□ -0.77
RTF1P53064 NDJ1YOL104C 1059 nt10.27□□□□□ -0.77
RTF1P53064 THI73YLR004C 1572 nt10.26□□□□□ -0.77
RTF1P53064 RIM8YGL045W 1629 nt10.26□□□□□ -0.77
RTF1P53064 tE(CUC)DtE(CUC)D 72 nt10.26□□□□□ -0.77
RTF1P53064 tE(CUC)ItE(CUC)I 72 nt10.26□□□□□ -0.77
RTF1P53064 YDR510C-AYDR510C-A 117 nt10.26□□□□□ -0.77
RTF1P53064 YJL009WYJL009W 327 nt10.26□□□□□ -0.77
RTF1P53064 MRS4YKR052C 915 nt10.26□□□□□ -0.77
RTF1P53064 YIL168WYIL168W 384 nt10.25□□□□□ -0.77
RTF1P53064 BAP3YDR046C 1815 nt10.25□□□□□ -0.77
Retrieved 100 of 7,029 protein–RNA pairs in 30.1 ms