Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abca1P41233 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Abca1P41233 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Abca1P41233 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Abca1P41233 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Abca1P41233 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abca1P41233 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Abca1P41233 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Abca1P41233 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abca1P41233 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Abca1P41233 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abca1P41233 Gm16437-201ENSMUST00000025669 507 ntBASIC19.4■□□□□ 0.7
Abca1P41233 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Abca1P41233 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Abca1P41233 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.39■□□□□ 0.69
Abca1P41233 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abca1P41233 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abca1P41233 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abca1P41233 Gm11687-201ENSMUST00000118911 886 ntBASIC19.38■□□□□ 0.69
Abca1P41233 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Abca1P41233 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.37■□□□□ 0.69
Abca1P41233 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.37■□□□□ 0.69
Abca1P41233 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.37■□□□□ 0.69
Abca1P41233 Gm30023-201ENSMUST00000197970 889 ntBASIC19.37■□□□□ 0.69
Abca1P41233 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Abca1P41233 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abca1P41233 Gm7332-201ENSMUST00000118351 454 ntBASIC19.36■□□□□ 0.69
Abca1P41233 Scarna2-201ENSMUST00000157560 414 ntBASIC19.36■□□□□ 0.69
Abca1P41233 Gm9806-201ENSMUST00000051080 552 ntBASIC19.36■□□□□ 0.69
Abca1P41233 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abca1P41233 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.36■□□□□ 0.69
Abca1P41233 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Abca1P41233 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abca1P41233 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abca1P41233 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Abca1P41233 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Abca1P41233 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.35■□□□□ 0.69
Abca1P41233 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abca1P41233 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Abca1P41233 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abca1P41233 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Abca1P41233 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.35■□□□□ 0.69
Abca1P41233 Gm4799-201ENSMUST00000095396 657 ntBASIC19.35■□□□□ 0.69
Abca1P41233 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Abca1P41233 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abca1P41233 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.34■□□□□ 0.69
Abca1P41233 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abca1P41233 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abca1P41233 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abca1P41233 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abca1P41233 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Abca1P41233 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abca1P41233 Amer2-203ENSMUST00000225247 2662 ntBASIC19.32■□□□□ 0.68
Abca1P41233 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Abca1P41233 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.32■□□□□ 0.68
Abca1P41233 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Abca1P41233 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Abca1P41233 Gm45364-201ENSMUST00000210883 159 ntBASIC19.31■□□□□ 0.68
Abca1P41233 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Abca1P41233 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.31■□□□□ 0.68
Abca1P41233 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abca1P41233 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abca1P41233 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abca1P41233 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Abca1P41233 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.3■□□□□ 0.68
Abca1P41233 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Abca1P41233 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.3■□□□□ 0.68
Abca1P41233 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abca1P41233 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Abca1P41233 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abca1P41233 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.27■□□□□ 0.68
Abca1P41233 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.27■□□□□ 0.68
Abca1P41233 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abca1P41233 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.27■□□□□ 0.68
Abca1P41233 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Abca1P41233 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abca1P41233 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Abca1P41233 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abca1P41233 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Abca1P41233 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Abca1P41233 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca1P41233 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca1P41233 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abca1P41233 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Abca1P41233 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abca1P41233 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abca1P41233 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.23■□□□□ 0.67
Abca1P41233 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abca1P41233 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abca1P41233 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Abca1P41233 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abca1P41233 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.22■□□□□ 0.67
Abca1P41233 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abca1P41233 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Abca1P41233 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abca1P41233 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Abca1P41233 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.21■□□□□ 0.67
Abca1P41233 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abca1P41233 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.2■□□□□ 0.66
Abca1P41233 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms