Protein–RNA interactions for Protein: P29056

BRF1, Transcription factor IIIB 70 kDa subunit, yeastyeast

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRF1P29056 YMR007WYMR007W 381 nt8.33□□□□□ -1.08
BRF1P29056 YRF1-3YGR296W 5580 nt8.33□□□□□ -1.08
BRF1P29056 YRF1-6YNL339C 5580 nt8.33□□□□□ -1.08
BRF1P29056 YRF1-7YPL283C 5580 nt8.33□□□□□ -1.08
BRF1P29056 CBK1YNL161W 2271 nt8.32□□□□□ -1.08
BRF1P29056 REX2YLR059C 810 nt8.32□□□□□ -1.08
BRF1P29056 AIM34YMR003W 597 nt8.32□□□□□ -1.08
BRF1P29056 RPN14YGL004C 1254 nt8.31□□□□□ -1.08
BRF1P29056 MGM101YJR144W 810 nt8.31□□□□□ -1.08
BRF1P29056 AFG2YLR397C 2343 nt8.31□□□□□ -1.08
BRF1P29056 ENO1YGR254W 1314 nt8.3□□□□□ -1.08
BRF1P29056 ADE16YLR028C 1776 nt8.3□□□□□ -1.08
BRF1P29056 CRC1YOR100C 984 nt8.3□□□□□ -1.08
BRF1P29056 TOP3YLR234W 1971 nt8.3□□□□□ -1.08
BRF1P29056 YIL108WYIL108W 2091 nt8.3□□□□□ -1.08
BRF1P29056 HTS1YPR033C 1641 nt8.29□□□□□ -1.08
BRF1P29056 VBA3YCL069W 1377 nt8.29□□□□□ -1.08
BRF1P29056 SRP54YPR088C 1626 nt8.29□□□□□ -1.08
BRF1P29056 YDR467CYDR467C 327 nt8.28□□□□□ -1.08
BRF1P29056 SRP102YKL154W 735 nt8.28□□□□□ -1.08
BRF1P29056 RPL12BYDR418W 498 nt8.27□□□□□ -1.09
BRF1P29056 NPP2YEL016C 1482 nt8.26□□□□□ -1.09
BRF1P29056 tE(CUC)DtE(CUC)D 72 nt8.26□□□□□ -1.09
BRF1P29056 tE(CUC)ItE(CUC)I 72 nt8.26□□□□□ -1.09
BRF1P29056 YLR280CYLR280C 351 nt8.26□□□□□ -1.09
BRF1P29056 ERO1YML130C 1692 nt8.25□□□□□ -1.09
BRF1P29056 YOR343CYOR343C 327 nt8.25□□□□□ -1.09
BRF1P29056 FET5YFL041W 1869 nt8.25□□□□□ -1.09
BRF1P29056 SAN1YDR143C 1833 nt8.24□□□□□ -1.09
BRF1P29056 PFS2YNL317W 1398 nt8.24□□□□□ -1.09
BRF1P29056 TGA1tA(UGC)A 73 nt8.24□□□□□ -1.09
BRF1P29056 tA(UGC)EtA(UGC)E 73 nt8.24□□□□□ -1.09
BRF1P29056 tA(UGC)GtA(UGC)G 73 nt8.24□□□□□ -1.09
BRF1P29056 tA(UGC)LtA(UGC)L 73 nt8.24□□□□□ -1.09
BRF1P29056 tA(UGC)OtA(UGC)O 73 nt8.24□□□□□ -1.09
BRF1P29056 YGR210CYGR210C 1236 nt8.24□□□□□ -1.09
BRF1P29056 ITR1YDR497C 1755 nt8.23□□□□□ -1.09
BRF1P29056 snR4snR4 186 nt8.23□□□□□ -1.09
BRF1P29056 UBP13YBL067C 2244 nt8.23□□□□□ -1.09
BRF1P29056 ORT1YOR130C 879 nt8.22□□□□□ -1.09
BRF1P29056 KGD2YDR148C 1392 nt8.22□□□□□ -1.09
BRF1P29056 MLS1YNL117W 1665 nt8.21□□□□□ -1.09
BRF1P29056 CHA1YCL064C 1083 nt8.21□□□□□ -1.1
BRF1P29056 YPT11YNL304W 1254 nt8.21□□□□□ -1.1
BRF1P29056 YAL016C-AYAL016C-A 315 nt8.2□□□□□ -1.1
BRF1P29056 FCY1YPR062W 477 nt8.2□□□□□ -1.1
BRF1P29056 YRF1-1YDR545W 5391 nt8.19□□□□□ -1.1
BRF1P29056 YRF1-5YLR467W 5391 nt8.19□□□□□ -1.1
BRF1P29056 YRF1-8YOR396W 5391 nt8.19□□□□□ -1.1
BRF1P29056 ATP10YLR393W 840 nt8.19□□□□□ -1.1
BRF1P29056 PAU21YOR394W 495 nt8.19□□□□□ -1.1
BRF1P29056 PAU22YPL282C 495 nt8.19□□□□□ -1.1
BRF1P29056 HSV2YGR223C 1347 nt8.19□□□□□ -1.1
BRF1P29056 MSB3YNL293W 1902 nt8.19□□□□□ -1.1
BRF1P29056 YFR020WYFR020W 699 nt8.18□□□□□ -1.1
BRF1P29056 YBL095WYBL095W 813 nt8.18□□□□□ -1.1
BRF1P29056 YOR268CYOR268C 399 nt8.18□□□□□ -1.1
BRF1P29056 HRA1HRA1 564 nt8.17□□□□□ -1.1
BRF1P29056 HXT13YEL069C 1695 nt8.17□□□□□ -1.1
BRF1P29056 SBP1YHL034C 885 nt8.16□□□□□ -1.1
BRF1P29056 GPM1YKL152C 744 nt8.16□□□□□ -1.1
BRF1P29056 GAS1YMR307W 1680 nt8.16□□□□□ -1.1
BRF1P29056 YPL108WYPL108W 507 nt8.16□□□□□ -1.1
BRF1P29056 TRP2YER090W 1524 nt8.15□□□□□ -1.1
BRF1P29056 YNL040WYNL040W 1371 nt8.15□□□□□ -1.1
BRF1P29056 PTC6YCR079W 1329 nt8.15□□□□□ -1.1
BRF1P29056 HXT11YOL156W 1704 nt8.14□□□□□ -1.11
BRF1P29056 PRC1YMR297W 1599 nt8.14□□□□□ -1.11
BRF1P29056 RSM7YJR113C 744 nt8.13□□□□□ -1.11
BRF1P29056 ATO2YNR002C 849 nt8.13□□□□□ -1.11
BRF1P29056 YMC2YBR104W 990 nt8.12□□□□□ -1.11
BRF1P29056 SMC5YOL034W 3282 nt8.12□□□□□ -1.11
BRF1P29056 EMC3YKL207W 762 nt8.11□□□□□ -1.11
BRF1P29056 MAS2YHR024C 1449 nt8.11□□□□□ -1.11
BRF1P29056 AAT1YKL106W 1356 nt8.1□□□□□ -1.11
BRF1P29056 CRN1YLR429W 1956 nt8.1□□□□□ -1.11
BRF1P29056 SLM3YDL033C 1254 nt8.1□□□□□ -1.11
BRF1P29056 YJL160CYJL160C 864 nt8.1□□□□□ -1.11
BRF1P29056 DAL7YIR031C 1665 nt8.1□□□□□ -1.11
BRF1P29056 MFG1YDL233W 1377 nt8.1□□□□□ -1.11
BRF1P29056 GRH1YDR517W 1119 nt8.09□□□□□ -1.11
BRF1P29056 CMK2YOL016C 1344 nt8.08□□□□□ -1.12
BRF1P29056 YMR166CYMR166C 1107 nt8.08□□□□□ -1.12
BRF1P29056 LSP1YPL004C 1026 nt8.08□□□□□ -1.12
BRF1P29056 TOS1YBR162C 1368 nt8.08□□□□□ -1.12
BRF1P29056 GGA2YHR108W 1758 nt8.07□□□□□ -1.12
BRF1P29056 NAS6YGR232W 687 nt8.06□□□□□ -1.12
BRF1P29056 CDC13YDL220C 2775 nt8.05□□□□□ -1.12
BRF1P29056 YMR210WYMR210W 1350 nt8.05□□□□□ -1.12
BRF1P29056 ERR3YMR323W 1314 nt8.04□□□□□ -1.12
BRF1P29056 ERR1YOR393W 1314 nt8.04□□□□□ -1.12
BRF1P29056 ERR2YPL281C 1314 nt8.04□□□□□ -1.12
BRF1P29056 THI3YDL080C 1830 nt8.04□□□□□ -1.12
BRF1P29056 BIM1YER016W 1035 nt8.04□□□□□ -1.12
BRF1P29056 YLR460CYLR460C 1131 nt8.04□□□□□ -1.12
BRF1P29056 YMR253CYMR253C 1245 nt8.04□□□□□ -1.12
BRF1P29056 YMR316C-BYMR316C-B 309 nt8.04□□□□□ -1.12
BRF1P29056 SRM1YGL097W 1449 nt8.03□□□□□ -1.12
BRF1P29056 MRP1YDR347W 966 nt8.03□□□□□ -1.12
BRF1P29056 MRS4YKR052C 915 nt8.03□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms