Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.65■■□□□ 1.7
Pde6bP23440 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Pde6bP23440 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Pde6bP23440 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Pde6bP23440 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pde6bP23440 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pde6bP23440 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Pde6bP23440 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.61■■□□□ 1.69
Pde6bP23440 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pde6bP23440 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pde6bP23440 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Pde6bP23440 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pde6bP23440 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pde6bP23440 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Pde6bP23440 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pde6bP23440 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.59■■□□□ 1.69
Pde6bP23440 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pde6bP23440 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Pde6bP23440 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pde6bP23440 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pde6bP23440 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pde6bP23440 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pde6bP23440 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pde6bP23440 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.55■■□□□ 1.68
Pde6bP23440 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pde6bP23440 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pde6bP23440 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pde6bP23440 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.53■■□□□ 1.68
Pde6bP23440 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.53■■□□□ 1.68
Pde6bP23440 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Pde6bP23440 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pde6bP23440 Gm4799-201ENSMUST00000095396 657 ntBASIC25.53■■□□□ 1.68
Pde6bP23440 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pde6bP23440 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Pde6bP23440 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pde6bP23440 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pde6bP23440 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Pde6bP23440 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.51■■□□□ 1.67
Pde6bP23440 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Pde6bP23440 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pde6bP23440 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pde6bP23440 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pde6bP23440 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.5■■□□□ 1.67
Pde6bP23440 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pde6bP23440 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pde6bP23440 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.5■■□□□ 1.67
Pde6bP23440 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pde6bP23440 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.49■■□□□ 1.67
Pde6bP23440 Scarna2-201ENSMUST00000157560 414 ntBASIC25.49■■□□□ 1.67
Pde6bP23440 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pde6bP23440 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pde6bP23440 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.49■■□□□ 1.67
Pde6bP23440 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pde6bP23440 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.47■■□□□ 1.67
Pde6bP23440 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.47■■□□□ 1.67
Pde6bP23440 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pde6bP23440 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pde6bP23440 Gm11687-201ENSMUST00000118911 886 ntBASIC25.45■■□□□ 1.66
Pde6bP23440 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.45■■□□□ 1.66
Pde6bP23440 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.45■■□□□ 1.66
Pde6bP23440 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Pde6bP23440 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pde6bP23440 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pde6bP23440 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.44■■□□□ 1.66
Pde6bP23440 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.44■■□□□ 1.66
Pde6bP23440 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pde6bP23440 Gm9806-201ENSMUST00000051080 552 ntBASIC25.44■■□□□ 1.66
Pde6bP23440 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.44■■□□□ 1.66
Pde6bP23440 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pde6bP23440 Mir3960-201ENSMUST00000198213 73 ntBASIC25.43■■□□□ 1.66
Pde6bP23440 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pde6bP23440 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pde6bP23440 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pde6bP23440 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pde6bP23440 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.42■■□□□ 1.66
Pde6bP23440 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pde6bP23440 Gm37136-201ENSMUST00000194368 194 ntBASIC25.41■■□□□ 1.66
Pde6bP23440 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pde6bP23440 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
Pde6bP23440 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pde6bP23440 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pde6bP23440 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pde6bP23440 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pde6bP23440 Gm16437-201ENSMUST00000025669 507 ntBASIC25.38■■□□□ 1.65
Pde6bP23440 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pde6bP23440 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.37■■□□□ 1.65
Pde6bP23440 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pde6bP23440 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pde6bP23440 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pde6bP23440 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.35■■□□□ 1.65
Pde6bP23440 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Pde6bP23440 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pde6bP23440 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pde6bP23440 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Pde6bP23440 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pde6bP23440 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Pde6bP23440 Gm45364-201ENSMUST00000210883 159 ntBASIC25.33■■□□□ 1.65
Pde6bP23440 Amer2-203ENSMUST00000225247 2662 ntBASIC25.32■■□□□ 1.64
Pde6bP23440 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Pde6bP23440 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms