Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NeflP08551 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NeflP08551 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
NeflP08551 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
NeflP08551 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
NeflP08551 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.37■■■□□ 2.45
NeflP08551 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NeflP08551 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NeflP08551 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NeflP08551 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NeflP08551 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NeflP08551 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
NeflP08551 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.45
NeflP08551 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
NeflP08551 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NeflP08551 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NeflP08551 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NeflP08551 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NeflP08551 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NeflP08551 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
NeflP08551 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
NeflP08551 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NeflP08551 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NeflP08551 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
NeflP08551 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NeflP08551 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC30.28■■■□□ 2.44
NeflP08551 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
NeflP08551 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
NeflP08551 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
NeflP08551 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
NeflP08551 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
NeflP08551 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
NeflP08551 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC30.26■■■□□ 2.43
NeflP08551 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
NeflP08551 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
NeflP08551 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
NeflP08551 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
NeflP08551 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
NeflP08551 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
NeflP08551 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
NeflP08551 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.24■■■□□ 2.43
NeflP08551 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC30.24■■■□□ 2.43
NeflP08551 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
NeflP08551 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NeflP08551 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
NeflP08551 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC30.22■■■□□ 2.43
NeflP08551 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.21■■■□□ 2.43
NeflP08551 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NeflP08551 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
NeflP08551 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
NeflP08551 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
NeflP08551 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC30.19■■■□□ 2.42
NeflP08551 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.19■■■□□ 2.42
NeflP08551 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
NeflP08551 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NeflP08551 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NeflP08551 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NeflP08551 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
NeflP08551 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
NeflP08551 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC30.17■■■□□ 2.42
NeflP08551 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
NeflP08551 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC30.16■■■□□ 2.42
NeflP08551 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
NeflP08551 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
NeflP08551 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NeflP08551 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
NeflP08551 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
NeflP08551 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.15■■■□□ 2.42
NeflP08551 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
NeflP08551 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NeflP08551 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.14■■■□□ 2.42
NeflP08551 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
NeflP08551 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
NeflP08551 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NeflP08551 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NeflP08551 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NeflP08551 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.12■■■□□ 2.41
NeflP08551 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
NeflP08551 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
NeflP08551 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC30.11■■■□□ 2.41
NeflP08551 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NeflP08551 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NeflP08551 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
NeflP08551 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
NeflP08551 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
NeflP08551 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
NeflP08551 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
NeflP08551 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
NeflP08551 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
NeflP08551 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NeflP08551 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
NeflP08551 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.06■■■□□ 2.4
NeflP08551 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
NeflP08551 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
NeflP08551 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
NeflP08551 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
NeflP08551 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
NeflP08551 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NeflP08551 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
NeflP08551 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms