Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ercc1P07903 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ercc1P07903 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc1P07903 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc1P07903 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc1P07903 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc1P07903 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ercc1P07903 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc1P07903 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc1P07903 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ercc1P07903 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc1P07903 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc1P07903 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ercc1P07903 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc1P07903 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.55■□□□□ 0.72
Ercc1P07903 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ercc1P07903 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc1P07903 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ercc1P07903 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc1P07903 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ercc1P07903 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ercc1P07903 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ercc1P07903 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc1P07903 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc1P07903 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc1P07903 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc1P07903 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ercc1P07903 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ercc1P07903 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ercc1P07903 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc1P07903 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc1P07903 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc1P07903 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc1P07903 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc1P07903 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ercc1P07903 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.51■□□□□ 0.71
Ercc1P07903 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc1P07903 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.5■□□□□ 0.71
Ercc1P07903 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc1P07903 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ercc1P07903 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Ercc1P07903 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.49■□□□□ 0.71
Ercc1P07903 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc1P07903 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.48■□□□□ 0.71
Ercc1P07903 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc1P07903 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc1P07903 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc1P07903 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc1P07903 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc1P07903 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc1P07903 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ercc1P07903 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ercc1P07903 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.46■□□□□ 0.71
Ercc1P07903 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Ercc1P07903 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc1P07903 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc1P07903 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc1P07903 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ercc1P07903 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc1P07903 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ercc1P07903 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc1P07903 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc1P07903 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc1P07903 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc1P07903 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc1P07903 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc1P07903 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc1P07903 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc1P07903 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc1P07903 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc1P07903 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc1P07903 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc1P07903 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc1P07903 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc1P07903 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc1P07903 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc1P07903 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc1P07903 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc1P07903 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ercc1P07903 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Ercc1P07903 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Ercc1P07903 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ercc1P07903 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc1P07903 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ercc1P07903 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc1P07903 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ercc1P07903 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc1P07903 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc1P07903 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Ercc1P07903 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ercc1P07903 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc1P07903 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc1P07903 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc1P07903 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc1P07903 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.37■□□□□ 0.69
Ercc1P07903 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc1P07903 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
Ercc1P07903 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.37■□□□□ 0.69
Ercc1P07903 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ercc1P07903 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms