Protein–RNA interactions for Protein: P03888

Mtnd1, NADH-ubiquinone oxidoreductase chain 1, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtnd1P03888 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Mtnd1P03888 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mtnd1P03888 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mtnd1P03888 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mtnd1P03888 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mtnd1P03888 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Mtnd1P03888 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Mtnd1P03888 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Mtnd1P03888 Zfp131-205ENSMUST00000223812 663 ntBASIC21.47■■□□□ 1.03
Mtnd1P03888 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.47■■□□□ 1.03
Mtnd1P03888 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mtnd1P03888 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Mtnd1P03888 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Mtnd1P03888 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mtnd1P03888 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mtnd1P03888 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.45■■□□□ 1.02
Mtnd1P03888 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Mtnd1P03888 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mtnd1P03888 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mtnd1P03888 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Mtnd1P03888 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mtnd1P03888 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Mtnd1P03888 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mtnd1P03888 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mtnd1P03888 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mtnd1P03888 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mtnd1P03888 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mtnd1P03888 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mtnd1P03888 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mtnd1P03888 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mtnd1P03888 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mtnd1P03888 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mtnd1P03888 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.41■■□□□ 1.02
Mtnd1P03888 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Mtnd1P03888 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.39■■□□□ 1.01
Mtnd1P03888 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mtnd1P03888 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Mtnd1P03888 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mtnd1P03888 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mtnd1P03888 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.38■■□□□ 1.01
Mtnd1P03888 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.38■■□□□ 1.01
Mtnd1P03888 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mtnd1P03888 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mtnd1P03888 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Mtnd1P03888 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.37■■□□□ 1.01
Mtnd1P03888 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Mtnd1P03888 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mtnd1P03888 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mtnd1P03888 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Mtnd1P03888 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Mtnd1P03888 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.35■■□□□ 1.01
Mtnd1P03888 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Mtnd1P03888 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mtnd1P03888 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mtnd1P03888 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.35■■□□□ 1.01
Mtnd1P03888 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mtnd1P03888 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Mtnd1P03888 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mtnd1P03888 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Mtnd1P03888 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mtnd1P03888 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Mtnd1P03888 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Mtnd1P03888 Gm9397-201ENSMUST00000200125 605 ntBASIC21.34■■□□□ 1.01
Mtnd1P03888 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Mtnd1P03888 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mtnd1P03888 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mtnd1P03888 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mtnd1P03888 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Mtnd1P03888 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Mtnd1P03888 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mtnd1P03888 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mtnd1P03888 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mtnd1P03888 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Mtnd1P03888 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mtnd1P03888 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mtnd1P03888 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mtnd1P03888 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mtnd1P03888 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Mtnd1P03888 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Mtnd1P03888 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mtnd1P03888 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.31■■□□□ 1
Mtnd1P03888 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Mtnd1P03888 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mtnd1P03888 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Mtnd1P03888 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mtnd1P03888 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Mtnd1P03888 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Mtnd1P03888 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.29■■□□□ 1
Mtnd1P03888 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mtnd1P03888 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Mtnd1P03888 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mtnd1P03888 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mtnd1P03888 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.28■■□□□ 1
Mtnd1P03888 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.28■■□□□ 1
Mtnd1P03888 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.28■■□□□ 1
Mtnd1P03888 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Mtnd1P03888 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.27■■□□□ 1
Mtnd1P03888 Gm24970-201ENSMUST00000175582 82 ntBASIC21.27■■□□□ 1
Mtnd1P03888 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.27■■□□□ 1
Mtnd1P03888 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms