Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Mir6538-201ENSMUST00000183713 110 ntBASIC25.36■■□□□ 1.65
Ttc3O88196 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ttc3O88196 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ttc3O88196 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.35■■□□□ 1.65
Ttc3O88196 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ttc3O88196 Amer2-203ENSMUST00000225247 2662 ntBASIC25.34■■□□□ 1.65
Ttc3O88196 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Ttc3O88196 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ttc3O88196 Gm6311-201ENSMUST00000073790 878 ntBASIC25.32■■□□□ 1.64
Ttc3O88196 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ttc3O88196 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ttc3O88196 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
Ttc3O88196 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.31■■□□□ 1.64
Ttc3O88196 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.31■■□□□ 1.64
Ttc3O88196 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Ttc3O88196 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ttc3O88196 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.3■■□□□ 1.64
Ttc3O88196 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ttc3O88196 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
Ttc3O88196 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.29■■□□□ 1.64
Ttc3O88196 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ttc3O88196 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.28■■□□□ 1.64
Ttc3O88196 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ttc3O88196 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ttc3O88196 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ttc3O88196 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Ttc3O88196 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ttc3O88196 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ttc3O88196 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Ttc3O88196 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ttc3O88196 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Ttc3O88196 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ttc3O88196 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ttc3O88196 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ttc3O88196 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ttc3O88196 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ttc3O88196 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Ttc3O88196 Gm37136-201ENSMUST00000194368 194 ntBASIC25.2■■□□□ 1.63
Ttc3O88196 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Ttc3O88196 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ttc3O88196 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ttc3O88196 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.2■■□□□ 1.62
Ttc3O88196 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ttc3O88196 Gm45364-201ENSMUST00000210883 159 ntBASIC25.19■■□□□ 1.62
Ttc3O88196 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ttc3O88196 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ttc3O88196 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Ttc3O88196 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ttc3O88196 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ttc3O88196 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.16■■□□□ 1.62
Ttc3O88196 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ttc3O88196 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ttc3O88196 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ttc3O88196 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ttc3O88196 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Ttc3O88196 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ttc3O88196 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.15■■□□□ 1.62
Ttc3O88196 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Ttc3O88196 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
Ttc3O88196 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Ttc3O88196 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ttc3O88196 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.13■■□□□ 1.61
Ttc3O88196 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ttc3O88196 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ttc3O88196 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Ttc3O88196 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ttc3O88196 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ttc3O88196 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Ttc3O88196 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ttc3O88196 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.1■■□□□ 1.61
Ttc3O88196 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ttc3O88196 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Ttc3O88196 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ttc3O88196 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ttc3O88196 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ttc3O88196 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ttc3O88196 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.08■■□□□ 1.61
Ttc3O88196 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ttc3O88196 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ttc3O88196 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.07■■□□□ 1.6
Ttc3O88196 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ttc3O88196 Cap2-205ENSMUST00000225824 1634 ntBASIC25.07■■□□□ 1.6
Ttc3O88196 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.07■■□□□ 1.6
Ttc3O88196 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ttc3O88196 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.05■■□□□ 1.6
Ttc3O88196 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ttc3O88196 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ttc3O88196 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Ttc3O88196 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ttc3O88196 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ttc3O88196 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ttc3O88196 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Ttc3O88196 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Ttc3O88196 Mir3960-201ENSMUST00000198213 73 ntBASIC24.99■■□□□ 1.59
Ttc3O88196 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ttc3O88196 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.97■■□□□ 1.59
Ttc3O88196 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ttc3O88196 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ttc3O88196 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ttc3O88196 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms