Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Col15a1O35206 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Col15a1O35206 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Col15a1O35206 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Col15a1O35206 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Col15a1O35206 Gm9806-201ENSMUST00000051080 552 ntBASIC31.24■■■□□ 2.59
Col15a1O35206 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC31.23■■■□□ 2.59
Col15a1O35206 Gm12366-201ENSMUST00000121722 873 ntBASIC31.23■■■□□ 2.59
Col15a1O35206 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC31.23■■■□□ 2.59
Col15a1O35206 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC31.23■■■□□ 2.59
Col15a1O35206 Gm5786-201ENSMUST00000085368 882 ntBASIC31.23■■■□□ 2.59
Col15a1O35206 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Col15a1O35206 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Col15a1O35206 Gm45364-201ENSMUST00000210883 159 ntBASIC31.22■■■□□ 2.59
Col15a1O35206 Gm4799-201ENSMUST00000095396 657 ntBASIC31.22■■■□□ 2.59
Col15a1O35206 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Col15a1O35206 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Col15a1O35206 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Col15a1O35206 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Col15a1O35206 AC154454.1-201ENSMUST00000225253 216 ntBASIC31.21■■■□□ 2.59
Col15a1O35206 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.21■■■□□ 2.59
Col15a1O35206 Pkd1-207ENSMUST00000228550 1050 ntBASIC31.21■■■□□ 2.59
Col15a1O35206 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC31.2■■■□□ 2.59
Col15a1O35206 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Col15a1O35206 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.2■■■□□ 2.59
Col15a1O35206 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC31.19■■■□□ 2.58
Col15a1O35206 Gm37136-201ENSMUST00000194368 194 ntBASIC31.19■■■□□ 2.58
Col15a1O35206 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Col15a1O35206 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Col15a1O35206 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Col15a1O35206 Gm11687-201ENSMUST00000118911 886 ntBASIC31.18■■■□□ 2.58
Col15a1O35206 Gm16437-201ENSMUST00000025669 507 ntBASIC31.18■■■□□ 2.58
Col15a1O35206 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Col15a1O35206 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.18■■■□□ 2.58
Col15a1O35206 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Col15a1O35206 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Col15a1O35206 Mir3960-201ENSMUST00000198213 73 ntBASIC31.17■■■□□ 2.58
Col15a1O35206 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Col15a1O35206 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC31.15■■■□□ 2.58
Col15a1O35206 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC31.14■■■□□ 2.58
Col15a1O35206 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Col15a1O35206 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC31.13■■■□□ 2.57
Col15a1O35206 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Col15a1O35206 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Col15a1O35206 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC31.13■■■□□ 2.57
Col15a1O35206 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Col15a1O35206 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Col15a1O35206 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
Col15a1O35206 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Col15a1O35206 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Col15a1O35206 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Col15a1O35206 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Col15a1O35206 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Col15a1O35206 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC31.08■■■□□ 2.57
Col15a1O35206 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
Col15a1O35206 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Col15a1O35206 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.07■■■□□ 2.56
Col15a1O35206 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
Col15a1O35206 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Col15a1O35206 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Col15a1O35206 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.04■■■□□ 2.56
Col15a1O35206 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
Col15a1O35206 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Col15a1O35206 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Col15a1O35206 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Col15a1O35206 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Col15a1O35206 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Col15a1O35206 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Col15a1O35206 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Col15a1O35206 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.01■■■□□ 2.56
Col15a1O35206 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31■■■□□ 2.55
Col15a1O35206 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31■■■□□ 2.55
Col15a1O35206 Gm27502-201ENSMUST00000183495 199 ntBASIC31■■■□□ 2.55
Col15a1O35206 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Col15a1O35206 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Col15a1O35206 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Col15a1O35206 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30.98■■■□□ 2.55
Col15a1O35206 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Col15a1O35206 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.97■■■□□ 2.55
Col15a1O35206 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC30.97■■■□□ 2.55
Col15a1O35206 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Col15a1O35206 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Col15a1O35206 Gm12818-201ENSMUST00000117562 1349 ntBASIC30.96■■■□□ 2.55
Col15a1O35206 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC30.96■■■□□ 2.55
Col15a1O35206 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC30.94■■■□□ 2.54
Col15a1O35206 Zxda-201ENSMUST00000117281 2621 ntBASIC30.94■■■□□ 2.54
Col15a1O35206 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Col15a1O35206 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Col15a1O35206 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30.92■■■□□ 2.54
Col15a1O35206 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Col15a1O35206 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Col15a1O35206 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
Col15a1O35206 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
Col15a1O35206 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Col15a1O35206 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Col15a1O35206 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Col15a1O35206 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Col15a1O35206 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Col15a1O35206 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Col15a1O35206 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms