Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gfra3O35118 Particl-201ENSMUST00000205370 1560 ntBASIC20.42■□□□□ 0.86
Gfra3O35118 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gfra3O35118 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.42■□□□□ 0.86
Gfra3O35118 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.41■□□□□ 0.86
Gfra3O35118 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gfra3O35118 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Gfra3O35118 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gfra3O35118 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gfra3O35118 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Gfra3O35118 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.4■□□□□ 0.86
Gfra3O35118 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.4■□□□□ 0.86
Gfra3O35118 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gfra3O35118 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gfra3O35118 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Gfra3O35118 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gfra3O35118 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gfra3O35118 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gfra3O35118 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gfra3O35118 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Gfra3O35118 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Gfra3O35118 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gfra3O35118 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gfra3O35118 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gfra3O35118 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gfra3O35118 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gfra3O35118 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gfra3O35118 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gfra3O35118 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gfra3O35118 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gfra3O35118 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gfra3O35118 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.31■□□□□ 0.84
Gfra3O35118 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gfra3O35118 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.3■□□□□ 0.84
Gfra3O35118 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gfra3O35118 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gfra3O35118 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gfra3O35118 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gfra3O35118 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gfra3O35118 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.28■□□□□ 0.84
Gfra3O35118 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gfra3O35118 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Gfra3O35118 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gfra3O35118 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gfra3O35118 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gfra3O35118 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gfra3O35118 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.24■□□□□ 0.83
Gfra3O35118 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gfra3O35118 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gfra3O35118 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gfra3O35118 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gfra3O35118 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra3O35118 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gfra3O35118 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.22■□□□□ 0.83
Gfra3O35118 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Gfra3O35118 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.21■□□□□ 0.83
Gfra3O35118 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gfra3O35118 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gfra3O35118 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Gfra3O35118 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gfra3O35118 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gfra3O35118 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.18■□□□□ 0.82
Gfra3O35118 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gfra3O35118 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Gfra3O35118 Gm37136-201ENSMUST00000194368 194 ntBASIC20.17■□□□□ 0.82
Gfra3O35118 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.16■□□□□ 0.82
Gfra3O35118 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Gfra3O35118 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Gfra3O35118 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gfra3O35118 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.14■□□□□ 0.81
Gfra3O35118 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gfra3O35118 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.13■□□□□ 0.81
Gfra3O35118 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.13■□□□□ 0.81
Gfra3O35118 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gfra3O35118 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gfra3O35118 Gm6311-201ENSMUST00000073790 878 ntBASIC20.12■□□□□ 0.81
Gfra3O35118 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gfra3O35118 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gfra3O35118 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.11■□□□□ 0.81
Gfra3O35118 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gfra3O35118 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Gfra3O35118 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gfra3O35118 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gfra3O35118 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Gfra3O35118 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.09■□□□□ 0.81
Gfra3O35118 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gfra3O35118 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gfra3O35118 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gfra3O35118 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Gfra3O35118 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.08■□□□□ 0.81
Gfra3O35118 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gfra3O35118 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.07■□□□□ 0.8
Gfra3O35118 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.07■□□□□ 0.8
Gfra3O35118 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Gfra3O35118 Gm4799-201ENSMUST00000095396 657 ntBASIC20.07■□□□□ 0.8
Gfra3O35118 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.06■□□□□ 0.8
Gfra3O35118 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gfra3O35118 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Gfra3O35118 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gfra3O35118 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms