Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hps1O08983 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Hps1O08983 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hps1O08983 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Hps1O08983 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hps1O08983 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.44■■□□□ 1.02
Hps1O08983 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hps1O08983 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hps1O08983 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hps1O08983 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hps1O08983 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Hps1O08983 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hps1O08983 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hps1O08983 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hps1O08983 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hps1O08983 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hps1O08983 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hps1O08983 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hps1O08983 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hps1O08983 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hps1O08983 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Hps1O08983 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.02
Hps1O08983 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.39■■□□□ 1.02
Hps1O08983 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hps1O08983 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.39■■□□□ 1.01
Hps1O08983 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hps1O08983 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.38■■□□□ 1.01
Hps1O08983 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hps1O08983 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hps1O08983 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hps1O08983 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.36■■□□□ 1.01
Hps1O08983 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hps1O08983 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hps1O08983 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Hps1O08983 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hps1O08983 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hps1O08983 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hps1O08983 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hps1O08983 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.33■■□□□ 1
Hps1O08983 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Hps1O08983 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.33■■□□□ 1
Hps1O08983 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hps1O08983 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Hps1O08983 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hps1O08983 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hps1O08983 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hps1O08983 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
Hps1O08983 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.31■■□□□ 1
Hps1O08983 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Hps1O08983 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Hps1O08983 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hps1O08983 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hps1O08983 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hps1O08983 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Hps1O08983 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Hps1O08983 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hps1O08983 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.29■■□□□ 1
Hps1O08983 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hps1O08983 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hps1O08983 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hps1O08983 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Hps1O08983 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.28■■□□□ 1
Hps1O08983 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Hps1O08983 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Hps1O08983 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Hps1O08983 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hps1O08983 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Hps1O08983 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.27■■□□□ 1
Hps1O08983 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.27■□□□□ 0.99
Hps1O08983 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hps1O08983 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hps1O08983 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hps1O08983 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hps1O08983 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hps1O08983 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Hps1O08983 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Hps1O08983 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.25■□□□□ 0.99
Hps1O08983 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hps1O08983 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hps1O08983 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hps1O08983 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hps1O08983 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hps1O08983 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hps1O08983 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hps1O08983 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.23■□□□□ 0.99
Hps1O08983 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Hps1O08983 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hps1O08983 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hps1O08983 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hps1O08983 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hps1O08983 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hps1O08983 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.22■□□□□ 0.99
Hps1O08983 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hps1O08983 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hps1O08983 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.99
Hps1O08983 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Hps1O08983 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.2■□□□□ 0.98
Hps1O08983 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hps1O08983 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hps1O08983 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms