Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Sgo2bJ3QMK1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sgo2bJ3QMK1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sgo2bJ3QMK1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sgo2bJ3QMK1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.51■■□□□ 1.35
Sgo2bJ3QMK1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sgo2bJ3QMK1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sgo2bJ3QMK1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.51■■□□□ 1.35
Sgo2bJ3QMK1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Sgo2bJ3QMK1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Sgo2bJ3QMK1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sgo2bJ3QMK1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sgo2bJ3QMK1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sgo2bJ3QMK1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sgo2bJ3QMK1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sgo2bJ3QMK1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sgo2bJ3QMK1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Sgo2bJ3QMK1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sgo2bJ3QMK1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sgo2bJ3QMK1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sgo2bJ3QMK1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.47■■□□□ 1.35
Sgo2bJ3QMK1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sgo2bJ3QMK1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sgo2bJ3QMK1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.45■■□□□ 1.35
Sgo2bJ3QMK1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.45■■□□□ 1.34
Sgo2bJ3QMK1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
Sgo2bJ3QMK1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Sgo2bJ3QMK1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sgo2bJ3QMK1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.45■■□□□ 1.34
Sgo2bJ3QMK1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Sgo2bJ3QMK1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sgo2bJ3QMK1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sgo2bJ3QMK1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sgo2bJ3QMK1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sgo2bJ3QMK1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Sgo2bJ3QMK1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sgo2bJ3QMK1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Sgo2bJ3QMK1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
Sgo2bJ3QMK1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sgo2bJ3QMK1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
Sgo2bJ3QMK1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sgo2bJ3QMK1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Sgo2bJ3QMK1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sgo2bJ3QMK1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sgo2bJ3QMK1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
Sgo2bJ3QMK1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.38■■□□□ 1.33
Sgo2bJ3QMK1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sgo2bJ3QMK1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.35■■□□□ 1.33
Sgo2bJ3QMK1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Sgo2bJ3QMK1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Sgo2bJ3QMK1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sgo2bJ3QMK1 Nkain2-201ENSMUST00000092602 558 ntBASIC23.34■■□□□ 1.33
Sgo2bJ3QMK1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sgo2bJ3QMK1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Sgo2bJ3QMK1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sgo2bJ3QMK1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.34■■□□□ 1.33
Sgo2bJ3QMK1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sgo2bJ3QMK1 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.33■■□□□ 1.33
Sgo2bJ3QMK1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sgo2bJ3QMK1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sgo2bJ3QMK1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sgo2bJ3QMK1 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.31■■□□□ 1.32
Sgo2bJ3QMK1 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.31■■□□□ 1.32
Sgo2bJ3QMK1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sgo2bJ3QMK1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sgo2bJ3QMK1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.29■■□□□ 1.32
Sgo2bJ3QMK1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sgo2bJ3QMK1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sgo2bJ3QMK1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sgo2bJ3QMK1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Sgo2bJ3QMK1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sgo2bJ3QMK1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Sgo2bJ3QMK1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Sgo2bJ3QMK1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.26■■□□□ 1.31
Sgo2bJ3QMK1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Sgo2bJ3QMK1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sgo2bJ3QMK1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sgo2bJ3QMK1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Sgo2bJ3QMK1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.25■■□□□ 1.31
Sgo2bJ3QMK1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sgo2bJ3QMK1 Particl-201ENSMUST00000205370 1560 ntBASIC23.25■■□□□ 1.31
Sgo2bJ3QMK1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Sgo2bJ3QMK1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Sgo2bJ3QMK1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sgo2bJ3QMK1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sgo2bJ3QMK1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sgo2bJ3QMK1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.23■■□□□ 1.31
Sgo2bJ3QMK1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sgo2bJ3QMK1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sgo2bJ3QMK1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sgo2bJ3QMK1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sgo2bJ3QMK1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.22■■□□□ 1.31
Sgo2bJ3QMK1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sgo2bJ3QMK1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sgo2bJ3QMK1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sgo2bJ3QMK1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sgo2bJ3QMK1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sgo2bJ3QMK1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sgo2bJ3QMK1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sgo2bJ3QMK1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms