Protein–RNA interactions for Protein: E9Q7P2

Cacna1i, Voltage-dependent T-type calcium channel subunit alpha, mousemouse

Predictions only

Length 2,199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1iE9Q7P2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1iE9Q7P2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1iE9Q7P2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cacna1iE9Q7P2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1iE9Q7P2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.42■□□□□ 0.7
Cacna1iE9Q7P2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1iE9Q7P2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.42■□□□□ 0.7
Cacna1iE9Q7P2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1iE9Q7P2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cacna1iE9Q7P2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1iE9Q7P2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1iE9Q7P2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1iE9Q7P2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.4■□□□□ 0.7
Cacna1iE9Q7P2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1iE9Q7P2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1iE9Q7P2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1iE9Q7P2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1iE9Q7P2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1iE9Q7P2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1iE9Q7P2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1iE9Q7P2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.36■□□□□ 0.69
Cacna1iE9Q7P2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1iE9Q7P2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1iE9Q7P2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1iE9Q7P2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacna1iE9Q7P2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1iE9Q7P2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1iE9Q7P2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1iE9Q7P2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1iE9Q7P2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cacna1iE9Q7P2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cacna1iE9Q7P2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1iE9Q7P2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1iE9Q7P2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cacna1iE9Q7P2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1iE9Q7P2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1iE9Q7P2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.31■□□□□ 0.68
Cacna1iE9Q7P2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
Cacna1iE9Q7P2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.3■□□□□ 0.68
Cacna1iE9Q7P2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.3■□□□□ 0.68
Cacna1iE9Q7P2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1iE9Q7P2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.29■□□□□ 0.68
Cacna1iE9Q7P2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1iE9Q7P2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.29■□□□□ 0.68
Cacna1iE9Q7P2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1iE9Q7P2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1iE9Q7P2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1iE9Q7P2 Gm6311-201ENSMUST00000073790 878 ntBASIC19.27■□□□□ 0.68
Cacna1iE9Q7P2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1iE9Q7P2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cacna1iE9Q7P2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1iE9Q7P2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1iE9Q7P2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1iE9Q7P2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1iE9Q7P2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1iE9Q7P2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1iE9Q7P2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1iE9Q7P2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cacna1iE9Q7P2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cacna1iE9Q7P2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.21■□□□□ 0.67
Cacna1iE9Q7P2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cacna1iE9Q7P2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1iE9Q7P2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1iE9Q7P2 Gm15039-201ENSMUST00000118914 875 ntBASIC19.2■□□□□ 0.66
Cacna1iE9Q7P2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1iE9Q7P2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cacna1iE9Q7P2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cacna1iE9Q7P2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1iE9Q7P2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1iE9Q7P2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1iE9Q7P2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1iE9Q7P2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1iE9Q7P2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1iE9Q7P2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1iE9Q7P2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1iE9Q7P2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1iE9Q7P2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms