Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.74■□□□□ 0.43
Gm5878E9PUB3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm5878E9PUB3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm5878E9PUB3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm5878E9PUB3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm5878E9PUB3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Gm5878E9PUB3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm5878E9PUB3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm5878E9PUB3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5878E9PUB3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.72■□□□□ 0.43
Gm5878E9PUB3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5878E9PUB3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5878E9PUB3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5878E9PUB3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gm5878E9PUB3 Particl-201ENSMUST00000205370 1560 ntBASIC17.7■□□□□ 0.42
Gm5878E9PUB3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5878E9PUB3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Gm5878E9PUB3 Gm30023-201ENSMUST00000197970 889 ntBASIC17.7■□□□□ 0.42
Gm5878E9PUB3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5878E9PUB3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5878E9PUB3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5878E9PUB3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5878E9PUB3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.7■□□□□ 0.42
Gm5878E9PUB3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5878E9PUB3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5878E9PUB3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5878E9PUB3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5878E9PUB3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5878E9PUB3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5878E9PUB3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5878E9PUB3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5878E9PUB3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5878E9PUB3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Gm5878E9PUB3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5878E9PUB3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm5878E9PUB3 Gm45855-201ENSMUST00000212546 880 ntBASIC17.67■□□□□ 0.42
Gm5878E9PUB3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm5878E9PUB3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5878E9PUB3 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.67■□□□□ 0.42
Gm5878E9PUB3 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.67■□□□□ 0.42
Gm5878E9PUB3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5878E9PUB3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5878E9PUB3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5878E9PUB3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5878E9PUB3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5878E9PUB3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gm5878E9PUB3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5878E9PUB3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5878E9PUB3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5878E9PUB3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5878E9PUB3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.63■□□□□ 0.41
Gm5878E9PUB3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5878E9PUB3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5878E9PUB3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Gm5878E9PUB3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5878E9PUB3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5878E9PUB3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5878E9PUB3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5878E9PUB3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm5878E9PUB3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm5878E9PUB3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5878E9PUB3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5878E9PUB3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5878E9PUB3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5878E9PUB3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5878E9PUB3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5878E9PUB3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm5878E9PUB3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Gm5878E9PUB3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm5878E9PUB3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm5878E9PUB3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm5878E9PUB3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Gm5878E9PUB3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm5878E9PUB3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gm5878E9PUB3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5878E9PUB3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5878E9PUB3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5878E9PUB3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm5878E9PUB3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5878E9PUB3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.56■□□□□ 0.4
Gm5878E9PUB3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm5878E9PUB3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5878E9PUB3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5878E9PUB3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5878E9PUB3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5878E9PUB3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5878E9PUB3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm5878E9PUB3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5878E9PUB3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5878E9PUB3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5878E9PUB3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm5878E9PUB3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5878E9PUB3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5878E9PUB3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5878E9PUB3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm5878E9PUB3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm5878E9PUB3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gm5878E9PUB3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5878E9PUB3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5878E9PUB3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms