Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp27D3YV89 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp27D3YV89 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Mmp27D3YV89 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp27D3YV89 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.67■□□□□ 0.74
Mmp27D3YV89 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp27D3YV89 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp27D3YV89 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Mmp27D3YV89 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp27D3YV89 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp27D3YV89 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp27D3YV89 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.64■□□□□ 0.74
Mmp27D3YV89 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mmp27D3YV89 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Mmp27D3YV89 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp27D3YV89 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Mmp27D3YV89 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.64■□□□□ 0.73
Mmp27D3YV89 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp27D3YV89 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp27D3YV89 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.64■□□□□ 0.73
Mmp27D3YV89 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp27D3YV89 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp27D3YV89 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp27D3YV89 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp27D3YV89 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp27D3YV89 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Mmp27D3YV89 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Mmp27D3YV89 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp27D3YV89 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp27D3YV89 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Mmp27D3YV89 Gm24970-201ENSMUST00000175582 82 ntBASIC19.61■□□□□ 0.73
Mmp27D3YV89 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.61■□□□□ 0.73
Mmp27D3YV89 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp27D3YV89 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp27D3YV89 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp27D3YV89 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp27D3YV89 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.6■□□□□ 0.73
Mmp27D3YV89 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp27D3YV89 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp27D3YV89 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp27D3YV89 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp27D3YV89 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp27D3YV89 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp27D3YV89 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp27D3YV89 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp27D3YV89 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mmp27D3YV89 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp27D3YV89 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp27D3YV89 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp27D3YV89 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp27D3YV89 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Mmp27D3YV89 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.56■□□□□ 0.72
Mmp27D3YV89 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp27D3YV89 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp27D3YV89 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp27D3YV89 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.55■□□□□ 0.72
Mmp27D3YV89 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp27D3YV89 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp27D3YV89 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp27D3YV89 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp27D3YV89 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp27D3YV89 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp27D3YV89 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.54■□□□□ 0.72
Mmp27D3YV89 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Mmp27D3YV89 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp27D3YV89 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp27D3YV89 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp27D3YV89 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp27D3YV89 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Mmp27D3YV89 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Mmp27D3YV89 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp27D3YV89 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mmp27D3YV89 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mmp27D3YV89 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mmp27D3YV89 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Mmp27D3YV89 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp27D3YV89 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Mmp27D3YV89 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp27D3YV89 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp27D3YV89 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp27D3YV89 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp27D3YV89 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp27D3YV89 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp27D3YV89 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.5■□□□□ 0.71
Mmp27D3YV89 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp27D3YV89 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp27D3YV89 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Mmp27D3YV89 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp27D3YV89 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.49■□□□□ 0.71
Mmp27D3YV89 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Mmp27D3YV89 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp27D3YV89 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp27D3YV89 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp27D3YV89 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp27D3YV89 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp27D3YV89 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.46■□□□□ 0.71
Mmp27D3YV89 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp27D3YV89 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp27D3YV89 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.45■□□□□ 0.7
Mmp27D3YV89 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms