Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Krt28A6BLY7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Krt28A6BLY7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Krt28A6BLY7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Krt28A6BLY7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Krt28A6BLY7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.93■■□□□ 1.9
Krt28A6BLY7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
Krt28A6BLY7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Krt28A6BLY7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Krt28A6BLY7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Krt28A6BLY7 Gm45364-201ENSMUST00000210883 159 ntBASIC26.9■■□□□ 1.9
Krt28A6BLY7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Krt28A6BLY7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Krt28A6BLY7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Krt28A6BLY7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Krt28A6BLY7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Krt28A6BLY7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Krt28A6BLY7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Krt28A6BLY7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Krt28A6BLY7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Krt28A6BLY7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Krt28A6BLY7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Krt28A6BLY7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.85■■□□□ 1.89
Krt28A6BLY7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Krt28A6BLY7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Krt28A6BLY7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Krt28A6BLY7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Krt28A6BLY7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Krt28A6BLY7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Krt28A6BLY7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
Krt28A6BLY7 Gm14523-201ENSMUST00000117260 558 ntBASIC26.81■■□□□ 1.88
Krt28A6BLY7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Krt28A6BLY7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.8■■□□□ 1.88
Krt28A6BLY7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Krt28A6BLY7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Krt28A6BLY7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Krt28A6BLY7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Krt28A6BLY7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.79■■□□□ 1.88
Krt28A6BLY7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Krt28A6BLY7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Krt28A6BLY7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.77■■□□□ 1.88
Krt28A6BLY7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Krt28A6BLY7 Gm22567-201ENSMUST00000175542 342 ntBASIC26.76■■□□□ 1.87
Krt28A6BLY7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Krt28A6BLY7 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.74■■□□□ 1.87
Krt28A6BLY7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Krt28A6BLY7 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.73■■□□□ 1.87
Krt28A6BLY7 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.73■■□□□ 1.87
Krt28A6BLY7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Krt28A6BLY7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Krt28A6BLY7 Gm37136-201ENSMUST00000194368 194 ntBASIC26.72■■□□□ 1.87
Krt28A6BLY7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Krt28A6BLY7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.7■■□□□ 1.86
Krt28A6BLY7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Krt28A6BLY7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Krt28A6BLY7 Gm5812-201ENSMUST00000061073 957 ntBASIC26.7■■□□□ 1.86
Krt28A6BLY7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Krt28A6BLY7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Krt28A6BLY7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.68■■□□□ 1.86
Krt28A6BLY7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
Krt28A6BLY7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Krt28A6BLY7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Krt28A6BLY7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.67■■□□□ 1.86
Krt28A6BLY7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.67■■□□□ 1.86
Krt28A6BLY7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Krt28A6BLY7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Krt28A6BLY7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Krt28A6BLY7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Krt28A6BLY7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Krt28A6BLY7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Krt28A6BLY7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Krt28A6BLY7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Krt28A6BLY7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Krt28A6BLY7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Krt28A6BLY7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Krt28A6BLY7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Krt28A6BLY7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Krt28A6BLY7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Krt28A6BLY7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Krt28A6BLY7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Krt28A6BLY7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Krt28A6BLY7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Krt28A6BLY7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Krt28A6BLY7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.61■■□□□ 1.85
Krt28A6BLY7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Krt28A6BLY7 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.59■■□□□ 1.85
Krt28A6BLY7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.58■■□□□ 1.85
Krt28A6BLY7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.58■■□□□ 1.85
Krt28A6BLY7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Krt28A6BLY7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.57■■□□□ 1.84
Krt28A6BLY7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Krt28A6BLY7 Gm5921-201ENSMUST00000075898 882 ntBASIC26.57■■□□□ 1.84
Krt28A6BLY7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Krt28A6BLY7 Gm10420-201ENSMUST00000121713 882 ntBASIC26.56■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms