Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm3880A0A1B0GSB3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3880A0A1B0GSB3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm3880A0A1B0GSB3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Gm3880A0A1B0GSB3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm3880A0A1B0GSB3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3880A0A1B0GSB3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3880A0A1B0GSB3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3880A0A1B0GSB3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Gm3880A0A1B0GSB3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm3880A0A1B0GSB3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Gm3880A0A1B0GSB3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3880A0A1B0GSB3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm3880A0A1B0GSB3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Gm3880A0A1B0GSB3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC11.82□□□□□ -0.52
Gm3880A0A1B0GSB3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3880A0A1B0GSB3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3880A0A1B0GSB3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3880A0A1B0GSB3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3880A0A1B0GSB3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3880A0A1B0GSB3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3880A0A1B0GSB3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3880A0A1B0GSB3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3880A0A1B0GSB3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm3880A0A1B0GSB3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC11.8□□□□□ -0.52
Gm3880A0A1B0GSB3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gm3880A0A1B0GSB3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm3880A0A1B0GSB3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3880A0A1B0GSB3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3880A0A1B0GSB3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3880A0A1B0GSB3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3880A0A1B0GSB3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3880A0A1B0GSB3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Gm3880A0A1B0GSB3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3880A0A1B0GSB3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3880A0A1B0GSB3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3880A0A1B0GSB3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3880A0A1B0GSB3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gm3880A0A1B0GSB3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3880A0A1B0GSB3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gm3880A0A1B0GSB3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3880A0A1B0GSB3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Gm3880A0A1B0GSB3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3880A0A1B0GSB3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC11.77□□□□□ -0.52
Gm3880A0A1B0GSB3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3880A0A1B0GSB3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3880A0A1B0GSB3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3880A0A1B0GSB3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3880A0A1B0GSB3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Gm3880A0A1B0GSB3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC11.76□□□□□ -0.53
Gm3880A0A1B0GSB3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Gm3880A0A1B0GSB3 Gm6277-202ENSMUST00000224036 2779 ntBASIC11.76□□□□□ -0.53
Gm3880A0A1B0GSB3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3880A0A1B0GSB3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC11.76□□□□□ -0.53
Gm3880A0A1B0GSB3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Gm3880A0A1B0GSB3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3880A0A1B0GSB3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3880A0A1B0GSB3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3880A0A1B0GSB3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC11.76□□□□□ -0.53
Gm3880A0A1B0GSB3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm3880A0A1B0GSB3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm3880A0A1B0GSB3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm3880A0A1B0GSB3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm3880A0A1B0GSB3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Gm3880A0A1B0GSB3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm3880A0A1B0GSB3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm3880A0A1B0GSB3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm3880A0A1B0GSB3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm3880A0A1B0GSB3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm3880A0A1B0GSB3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm3880A0A1B0GSB3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm3880A0A1B0GSB3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm3880A0A1B0GSB3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm3880A0A1B0GSB3 Il17rd-202ENSMUST00000223942 2186 ntBASIC11.73□□□□□ -0.53
Gm3880A0A1B0GSB3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm3880A0A1B0GSB3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm3880A0A1B0GSB3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gm3880A0A1B0GSB3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm3880A0A1B0GSB3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm3880A0A1B0GSB3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Gm3880A0A1B0GSB3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm3880A0A1B0GSB3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm3880A0A1B0GSB3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm3880A0A1B0GSB3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3880A0A1B0GSB3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3880A0A1B0GSB3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3880A0A1B0GSB3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3880A0A1B0GSB3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm3880A0A1B0GSB3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Gm3880A0A1B0GSB3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gm3880A0A1B0GSB3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Gm3880A0A1B0GSB3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Gm3880A0A1B0GSB3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3880A0A1B0GSB3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3880A0A1B0GSB3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Gm3880A0A1B0GSB3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3880A0A1B0GSB3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3880A0A1B0GSB3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm3880A0A1B0GSB3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC11.69□□□□□ -0.54
Gm3880A0A1B0GSB3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms