Protein–RNA interactions for Protein: A0A140T8L3

Rpl7a-ps5, Ribosomal protein L7A, pseudogene 5, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl7a-ps5A0A140T8L3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.41■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.39■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.39■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.34■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.34■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rpl7a-ps5A0A140T8L3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.31■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.29■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.29■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.28■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.27■□□□□ 0.84
Rpl7a-ps5A0A140T8L3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.26■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.26■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.25■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms