Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl13a-ps1A0A140T8K2 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.57■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Gm30023-201ENSMUST00000197970 889 ntBASIC19.57■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Cap2-205ENSMUST00000225824 1634 ntBASIC19.56■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.56■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.54■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.53■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rpl13a-ps1A0A140T8K2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.5■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.49■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.47■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.47■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl13a-ps1A0A140T8K2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.44■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.43■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.43■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.41■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.4■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl13a-ps1A0A140T8K2 Gm11687-201ENSMUST00000118911 886 ntBASIC19.39■□□□□ 0.69
Rpl13a-ps1A0A140T8K2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl13a-ps1A0A140T8K2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.39■□□□□ 0.69
Rpl13a-ps1A0A140T8K2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl13a-ps1A0A140T8K2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpl13a-ps1A0A140T8K2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.38■□□□□ 0.69
Rpl13a-ps1A0A140T8K2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpl13a-ps1A0A140T8K2 Gm9806-201ENSMUST00000051080 552 ntBASIC19.37■□□□□ 0.69
Rpl13a-ps1A0A140T8K2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl13a-ps1A0A140T8K2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.36■□□□□ 0.69
Rpl13a-ps1A0A140T8K2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms