Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ighv1-23A0A0A6YVW3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.41■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ighv1-23A0A0A6YVW3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ighv1-23A0A0A6YVW3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-23A0A0A6YVW3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.39■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-23A0A0A6YVW3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-23A0A0A6YVW3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.37■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.37■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-23A0A0A6YVW3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.36■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Zfp131-205ENSMUST00000223812 663 ntBASIC17.36■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-23A0A0A6YVW3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-23A0A0A6YVW3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-23A0A0A6YVW3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.3■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.3■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-23A0A0A6YVW3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.3■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ighv1-23A0A0A6YVW3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-23A0A0A6YVW3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-23A0A0A6YVW3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-23A0A0A6YVW3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Ighv1-23A0A0A6YVW3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-23A0A0A6YVW3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-23A0A0A6YVW3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-23A0A0A6YVW3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-23A0A0A6YVW3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Ighv1-23A0A0A6YVW3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-23A0A0A6YVW3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-23A0A0A6YVW3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-23A0A0A6YVW3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms