Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav14d-1A0A075B6B1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav14d-1A0A075B6B1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav14d-1A0A075B6B1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav14d-1A0A075B6B1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav14d-1A0A075B6B1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav14d-1A0A075B6B1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14d-1A0A075B6B1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14d-1A0A075B6B1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14d-1A0A075B6B1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14d-1A0A075B6B1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav14d-1A0A075B6B1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav14d-1A0A075B6B1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav14d-1A0A075B6B1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav14d-1A0A075B6B1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav14d-1A0A075B6B1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav14d-1A0A075B6B1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14d-1A0A075B6B1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14d-1A0A075B6B1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14d-1A0A075B6B1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav14d-1A0A075B6B1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Trav14d-1A0A075B6B1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav14d-1A0A075B6B1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav14d-1A0A075B6B1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav14d-1A0A075B6B1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav14d-1A0A075B6B1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav14d-1A0A075B6B1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav14d-1A0A075B6B1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14d-1A0A075B6B1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14d-1A0A075B6B1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14d-1A0A075B6B1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14d-1A0A075B6B1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14d-1A0A075B6B1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav14d-1A0A075B6B1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav14d-1A0A075B6B1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav14d-1A0A075B6B1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav14d-1A0A075B6B1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav14d-1A0A075B6B1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav14d-1A0A075B6B1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav14d-1A0A075B6B1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav14d-1A0A075B6B1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav14d-1A0A075B6B1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Trav14d-1A0A075B6B1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav14d-1A0A075B6B1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav14d-1A0A075B6B1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav14d-1A0A075B6B1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav14d-1A0A075B6B1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav14d-1A0A075B6B1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav14d-1A0A075B6B1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav14d-1A0A075B6B1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav14d-1A0A075B6B1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav14d-1A0A075B6B1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav14d-1A0A075B6B1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav14d-1A0A075B6B1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav14d-1A0A075B6B1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav14d-1A0A075B6B1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav14d-1A0A075B6B1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav14d-1A0A075B6B1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav14d-1A0A075B6B1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav14d-1A0A075B6B1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav14d-1A0A075B6B1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav14d-1A0A075B6B1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav14d-1A0A075B6B1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav14d-1A0A075B6B1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav14d-1A0A075B6B1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.36■□□□□ 0.37
Trav14d-1A0A075B6B1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav14d-1A0A075B6B1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.36■□□□□ 0.37
Trav14d-1A0A075B6B1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav14d-1A0A075B6B1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav14d-1A0A075B6B1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav14d-1A0A075B6B1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav14d-1A0A075B6B1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav14d-1A0A075B6B1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav14d-1A0A075B6B1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trav14d-1A0A075B6B1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav14d-1A0A075B6B1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav14d-1A0A075B6B1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav14d-1A0A075B6B1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav14d-1A0A075B6B1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav14d-1A0A075B6B1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav14d-1A0A075B6B1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav14d-1A0A075B6B1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14d-1A0A075B6B1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14d-1A0A075B6B1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14d-1A0A075B6B1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14d-1A0A075B6B1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14d-1A0A075B6B1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14d-1A0A075B6B1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav14d-1A0A075B6B1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.33■□□□□ 0.37
Trav14d-1A0A075B6B1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav14d-1A0A075B6B1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav14d-1A0A075B6B1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav14d-1A0A075B6B1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav14d-1A0A075B6B1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Trav14d-1A0A075B6B1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav14d-1A0A075B6B1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav14d-1A0A075B6B1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav14d-1A0A075B6B1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav14d-1A0A075B6B1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav14d-1A0A075B6B1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms