Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-7A0A075B6B0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-7A0A075B6B0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-7A0A075B6B0 Gm6821-201ENSMUST00000107540 542 ntBASIC18.01■□□□□ 0.47
Trav6d-7A0A075B6B0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6d-7A0A075B6B0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6d-7A0A075B6B0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-7A0A075B6B0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-7A0A075B6B0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-7A0A075B6B0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-7A0A075B6B0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-7A0A075B6B0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Trav6d-7A0A075B6B0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-7A0A075B6B0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-7A0A075B6B0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav6d-7A0A075B6B0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6d-7A0A075B6B0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6d-7A0A075B6B0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6d-7A0A075B6B0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6d-7A0A075B6B0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav6d-7A0A075B6B0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-7A0A075B6B0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.96■□□□□ 0.47
Trav6d-7A0A075B6B0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav6d-7A0A075B6B0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-7A0A075B6B0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-7A0A075B6B0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-7A0A075B6B0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav6d-7A0A075B6B0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-7A0A075B6B0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-7A0A075B6B0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-7A0A075B6B0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-7A0A075B6B0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-7A0A075B6B0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav6d-7A0A075B6B0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav6d-7A0A075B6B0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6d-7A0A075B6B0 Gm8503-201ENSMUST00000118131 455 ntBASIC17.93■□□□□ 0.46
Trav6d-7A0A075B6B0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-7A0A075B6B0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-7A0A075B6B0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Trav6d-7A0A075B6B0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-7A0A075B6B0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6d-7A0A075B6B0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-7A0A075B6B0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.91■□□□□ 0.46
Trav6d-7A0A075B6B0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-7A0A075B6B0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.91■□□□□ 0.46
Trav6d-7A0A075B6B0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-7A0A075B6B0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-7A0A075B6B0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.91■□□□□ 0.46
Trav6d-7A0A075B6B0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-7A0A075B6B0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6d-7A0A075B6B0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6d-7A0A075B6B0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6d-7A0A075B6B0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6d-7A0A075B6B0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav6d-7A0A075B6B0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6d-7A0A075B6B0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6d-7A0A075B6B0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.89■□□□□ 0.45
Trav6d-7A0A075B6B0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6d-7A0A075B6B0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6d-7A0A075B6B0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6d-7A0A075B6B0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6d-7A0A075B6B0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6d-7A0A075B6B0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6d-7A0A075B6B0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6d-7A0A075B6B0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6d-7A0A075B6B0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6d-7A0A075B6B0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav6d-7A0A075B6B0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6d-7A0A075B6B0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav6d-7A0A075B6B0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6d-7A0A075B6B0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6d-7A0A075B6B0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6d-7A0A075B6B0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6d-7A0A075B6B0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6d-7A0A075B6B0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6d-7A0A075B6B0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6d-7A0A075B6B0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6d-7A0A075B6B0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6d-7A0A075B6B0 Nkain2-201ENSMUST00000092602 558 ntBASIC17.84■□□□□ 0.45
Trav6d-7A0A075B6B0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6d-7A0A075B6B0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav6d-7A0A075B6B0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6d-7A0A075B6B0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6d-7A0A075B6B0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6d-7A0A075B6B0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6d-7A0A075B6B0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6d-7A0A075B6B0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6d-7A0A075B6B0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6d-7A0A075B6B0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6d-7A0A075B6B0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6d-7A0A075B6B0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6d-7A0A075B6B0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6d-7A0A075B6B0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6d-7A0A075B6B0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6d-7A0A075B6B0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6d-7A0A075B6B0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6d-7A0A075B6B0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav6d-7A0A075B6B0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6d-7A0A075B6B0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav6d-7A0A075B6B0 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms