Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdv1A0A075B657 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdv1A0A075B657 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Trdv1A0A075B657 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Trdv1A0A075B657 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdv1A0A075B657 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdv1A0A075B657 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trdv1A0A075B657 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trdv1A0A075B657 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdv1A0A075B657 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trdv1A0A075B657 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.87■□□□□ 0.45
Trdv1A0A075B657 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdv1A0A075B657 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trdv1A0A075B657 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdv1A0A075B657 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdv1A0A075B657 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdv1A0A075B657 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdv1A0A075B657 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdv1A0A075B657 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trdv1A0A075B657 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trdv1A0A075B657 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trdv1A0A075B657 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trdv1A0A075B657 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trdv1A0A075B657 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trdv1A0A075B657 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trdv1A0A075B657 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trdv1A0A075B657 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trdv1A0A075B657 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trdv1A0A075B657 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trdv1A0A075B657 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Trdv1A0A075B657 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trdv1A0A075B657 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trdv1A0A075B657 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trdv1A0A075B657 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trdv1A0A075B657 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdv1A0A075B657 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trdv1A0A075B657 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.81■□□□□ 0.44
Trdv1A0A075B657 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdv1A0A075B657 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdv1A0A075B657 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trdv1A0A075B657 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdv1A0A075B657 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdv1A0A075B657 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trdv1A0A075B657 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trdv1A0A075B657 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trdv1A0A075B657 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trdv1A0A075B657 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trdv1A0A075B657 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trdv1A0A075B657 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Trdv1A0A075B657 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trdv1A0A075B657 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdv1A0A075B657 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trdv1A0A075B657 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdv1A0A075B657 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trdv1A0A075B657 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdv1A0A075B657 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trdv1A0A075B657 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.77■□□□□ 0.44
Trdv1A0A075B657 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trdv1A0A075B657 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trdv1A0A075B657 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trdv1A0A075B657 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdv1A0A075B657 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdv1A0A075B657 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.76■□□□□ 0.43
Trdv1A0A075B657 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trdv1A0A075B657 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdv1A0A075B657 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trdv1A0A075B657 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.76■□□□□ 0.43
Trdv1A0A075B657 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdv1A0A075B657 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdv1A0A075B657 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdv1A0A075B657 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdv1A0A075B657 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdv1A0A075B657 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdv1A0A075B657 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdv1A0A075B657 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdv1A0A075B657 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.74■□□□□ 0.43
Trdv1A0A075B657 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.74■□□□□ 0.43
Trdv1A0A075B657 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trdv1A0A075B657 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trdv1A0A075B657 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trdv1A0A075B657 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.73■□□□□ 0.43
Trdv1A0A075B657 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trdv1A0A075B657 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.72■□□□□ 0.43
Trdv1A0A075B657 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdv1A0A075B657 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trdv1A0A075B657 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trdv1A0A075B657 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trdv1A0A075B657 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trdv1A0A075B657 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdv1A0A075B657 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trdv1A0A075B657 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trdv1A0A075B657 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trdv1A0A075B657 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdv1A0A075B657 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdv1A0A075B657 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdv1A0A075B657 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdv1A0A075B657 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdv1A0A075B657 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trdv1A0A075B657 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.68■□□□□ 0.42
Trdv1A0A075B657 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms