Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav7n-4A0A075B620 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7n-4A0A075B620 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7n-4A0A075B620 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav7n-4A0A075B620 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Trav7n-4A0A075B620 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7n-4A0A075B620 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7n-4A0A075B620 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav7n-4A0A075B620 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7n-4A0A075B620 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.78■□□□□ 0.44
Trav7n-4A0A075B620 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7n-4A0A075B620 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7n-4A0A075B620 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7n-4A0A075B620 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trav7n-4A0A075B620 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-4A0A075B620 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-4A0A075B620 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-4A0A075B620 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-4A0A075B620 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-4A0A075B620 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-4A0A075B620 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-4A0A075B620 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7n-4A0A075B620 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7n-4A0A075B620 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav7n-4A0A075B620 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav7n-4A0A075B620 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7n-4A0A075B620 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7n-4A0A075B620 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7n-4A0A075B620 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7n-4A0A075B620 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7n-4A0A075B620 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7n-4A0A075B620 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7n-4A0A075B620 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7n-4A0A075B620 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7n-4A0A075B620 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7n-4A0A075B620 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7n-4A0A075B620 Gm27322-201ENSMUST00000184007 104 ntBASIC17.72■□□□□ 0.43
Trav7n-4A0A075B620 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Trav7n-4A0A075B620 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7n-4A0A075B620 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7n-4A0A075B620 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-4A0A075B620 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav7n-4A0A075B620 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-4A0A075B620 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-4A0A075B620 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-4A0A075B620 Gm25262-201ENSMUST00000174934 133 ntBASIC17.71■□□□□ 0.43
Trav7n-4A0A075B620 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav7n-4A0A075B620 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-4A0A075B620 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trav7n-4A0A075B620 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Trav7n-4A0A075B620 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7n-4A0A075B620 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav7n-4A0A075B620 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7n-4A0A075B620 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7n-4A0A075B620 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Trav7n-4A0A075B620 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7n-4A0A075B620 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7n-4A0A075B620 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7n-4A0A075B620 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7n-4A0A075B620 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7n-4A0A075B620 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7n-4A0A075B620 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.69■□□□□ 0.42
Trav7n-4A0A075B620 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-4A0A075B620 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-4A0A075B620 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Trav7n-4A0A075B620 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-4A0A075B620 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-4A0A075B620 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav7n-4A0A075B620 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-4A0A075B620 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-4A0A075B620 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7n-4A0A075B620 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Trav7n-4A0A075B620 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-4A0A075B620 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-4A0A075B620 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-4A0A075B620 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-4A0A075B620 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-4A0A075B620 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7n-4A0A075B620 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav7n-4A0A075B620 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7n-4A0A075B620 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav7n-4A0A075B620 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Trav7n-4A0A075B620 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.66■□□□□ 0.42
Trav7n-4A0A075B620 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7n-4A0A075B620 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav7n-4A0A075B620 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7n-4A0A075B620 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7n-4A0A075B620 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7n-4A0A075B620 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7n-4A0A075B620 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.65■□□□□ 0.42
Trav7n-4A0A075B620 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7n-4A0A075B620 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7n-4A0A075B620 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7n-4A0A075B620 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav7n-4A0A075B620 Peli2-204ENSMUST00000226513 1320 ntBASIC17.65■□□□□ 0.42
Trav7n-4A0A075B620 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav7n-4A0A075B620 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7n-4A0A075B620 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav7n-4A0A075B620 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7n-4A0A075B620 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms