Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav5-1A0A075B5Z7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav5-1A0A075B5Z7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav5-1A0A075B5Z7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav5-1A0A075B5Z7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav5-1A0A075B5Z7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.42■□□□□ 0.86
Trav5-1A0A075B5Z7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Trav5-1A0A075B5Z7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.41■□□□□ 0.86
Trav5-1A0A075B5Z7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trav5-1A0A075B5Z7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav5-1A0A075B5Z7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav5-1A0A075B5Z7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav5-1A0A075B5Z7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav5-1A0A075B5Z7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav5-1A0A075B5Z7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trav5-1A0A075B5Z7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav5-1A0A075B5Z7 Amer2-203ENSMUST00000225247 2662 ntBASIC20.38■□□□□ 0.85
Trav5-1A0A075B5Z7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav5-1A0A075B5Z7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.36■□□□□ 0.85
Trav5-1A0A075B5Z7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.36■□□□□ 0.85
Trav5-1A0A075B5Z7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav5-1A0A075B5Z7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav5-1A0A075B5Z7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Trav5-1A0A075B5Z7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.35■□□□□ 0.85
Trav5-1A0A075B5Z7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav5-1A0A075B5Z7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav5-1A0A075B5Z7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav5-1A0A075B5Z7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trav5-1A0A075B5Z7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav5-1A0A075B5Z7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav5-1A0A075B5Z7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav5-1A0A075B5Z7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav5-1A0A075B5Z7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav5-1A0A075B5Z7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.28■□□□□ 0.84
Trav5-1A0A075B5Z7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav5-1A0A075B5Z7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav5-1A0A075B5Z7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.27■□□□□ 0.84
Trav5-1A0A075B5Z7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trav5-1A0A075B5Z7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trav5-1A0A075B5Z7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav5-1A0A075B5Z7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trav5-1A0A075B5Z7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.25■□□□□ 0.83
Trav5-1A0A075B5Z7 Gm37136-201ENSMUST00000194368 194 ntBASIC20.25■□□□□ 0.83
Trav5-1A0A075B5Z7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav5-1A0A075B5Z7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav5-1A0A075B5Z7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav5-1A0A075B5Z7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav5-1A0A075B5Z7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav5-1A0A075B5Z7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.24■□□□□ 0.83
Trav5-1A0A075B5Z7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav5-1A0A075B5Z7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.23■□□□□ 0.83
Trav5-1A0A075B5Z7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.23■□□□□ 0.83
Trav5-1A0A075B5Z7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trav5-1A0A075B5Z7 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.22■□□□□ 0.83
Trav5-1A0A075B5Z7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav5-1A0A075B5Z7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trav5-1A0A075B5Z7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav5-1A0A075B5Z7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav5-1A0A075B5Z7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trav5-1A0A075B5Z7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trav5-1A0A075B5Z7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.2■□□□□ 0.82
Trav5-1A0A075B5Z7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav5-1A0A075B5Z7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav5-1A0A075B5Z7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trav5-1A0A075B5Z7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.19■□□□□ 0.82
Trav5-1A0A075B5Z7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav5-1A0A075B5Z7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trav5-1A0A075B5Z7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav5-1A0A075B5Z7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav5-1A0A075B5Z7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav5-1A0A075B5Z7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav5-1A0A075B5Z7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav5-1A0A075B5Z7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav5-1A0A075B5Z7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trav5-1A0A075B5Z7 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.16■□□□□ 0.82
Trav5-1A0A075B5Z7 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.16■□□□□ 0.82
Trav5-1A0A075B5Z7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.15■□□□□ 0.82
Trav5-1A0A075B5Z7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Trav5-1A0A075B5Z7 Gm4799-201ENSMUST00000095396 657 ntBASIC20.15■□□□□ 0.82
Trav5-1A0A075B5Z7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trav5-1A0A075B5Z7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav5-1A0A075B5Z7 Gm6311-201ENSMUST00000073790 878 ntBASIC20.13■□□□□ 0.81
Trav5-1A0A075B5Z7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav5-1A0A075B5Z7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Trav5-1A0A075B5Z7 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.12■□□□□ 0.81
Trav5-1A0A075B5Z7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav5-1A0A075B5Z7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.11■□□□□ 0.81
Trav5-1A0A075B5Z7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav5-1A0A075B5Z7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav5-1A0A075B5Z7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trav5-1A0A075B5Z7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav5-1A0A075B5Z7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.09■□□□□ 0.81
Trav5-1A0A075B5Z7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.09■□□□□ 0.81
Trav5-1A0A075B5Z7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav5-1A0A075B5Z7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.08■□□□□ 0.81
Trav5-1A0A075B5Z7 Mir3960-201ENSMUST00000198213 73 ntBASIC20.08■□□□□ 0.81
Trav5-1A0A075B5Z7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav5-1A0A075B5Z7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.08■□□□□ 0.8
Trav5-1A0A075B5Z7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.08■□□□□ 0.8
Trav5-1A0A075B5Z7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms